Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq386 149 7e-31 >seq386 Length=121086 Score = 149 bits (164), Expect = 7e-31 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| | |||||| |||| ||||| || ||||| ||||| || || || ||||||| Sbjct 3172 GCTCGAAATGGTTGGCATAGAGATGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCT 3231 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 || || || || || ||||||||| ||| ||||| | ||| || || ||||| | Sbjct 3232 GCAGACCCGTGACCTGCGCCACCATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACG 3291 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | || || || || || | || | |||||| |||||||| || |||| ||||||| Sbjct 3292 GCACGCCGAGAAAGATATCGGCGGAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGG 3351 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 ||||||| |||||| ||||| |||||| |||||||||||||| | | | ||| | Sbjct 3352 CCACGTAGAACTGGAACAGGCAGTGGCAGGGCGGCAGCGCCATTTCATCGACGAGCGCCG 3411 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCC 147190 | ||||| || || || | ||| |||| Sbjct 3412 GATTCCATGCGGAAACGATCAGACGCC 3438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583431299553600