Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq2503 123 2e-23 seq82 91.5 1e-13 >seq2503 Length=4936 Score = 123 bits (136), Expect = 2e-23 Identities = 235/338 (70%), Gaps = 15/338 (4%) Strand=Plus/Plus Query 97504 CGTCGGATACGAAAGCGCCCTGTATCCGGAT-GGCACCCCGCGCCCCCACGGGCAGGAAT 97562 ||||||| ||||| ||||| || | ||||| |||| | | ||| ||| || | | Sbjct 99 CGTCGGAGACGAACGCGCCGTGAACACGGATCGGCAAACTGGTGCCCGGCGG-CATGTAG 157 Query 97563 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTA 97622 | | |||||| |||| || |||||||| ||||||| ||| | ||| |||| | Sbjct 158 AGCATGTCACCGTGGCCCAGCAGTTGCTCGGCGCCGCCCTGGTCGATGATGGTCCGGGAA 217 Query 97623 TCGGT---GAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGG 97679 ||| | | || | ||| |||| | | | ||| | ||||| ||||| ||| Sbjct 218 TCGATCTTGCTCGACACC-TGG--AACGCCATGCGGGTCGGGATGTTGGCCTTGATCAGG 274 Query 97680 CCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCG 97739 || |||| || ||||| || || ||||| ||||| |||| | || || ||||| || Sbjct 275 CCGGTGATCACGTCCACCGACGGACGCTGGGTCGCGAGGATCAAGTGGATCCCGGCGGCC 334 Query 97740 CGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCGACTTCTTTCTTGTAGCCGCCCA 97797 ||||||||||||||||| ||| | || ||| | |||| | |||||| | || || Sbjct 335 CGCGCCTTCTGGGCGATACGGGCGATCAGTT--CTTCGA---CCTTCTTGCCGACGATCA 389 Query 97798 TCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATG 97835 |||| | ||| || | |||||||||||| ||||||||| Sbjct 390 TCATCATGTCGGCAAATTCGTCGACCACCACCACGATG 427 >seq82 Length=463168 Score = 91.5 bits (100), Expect = 1e-13 Identities = 192/285 (67%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 97859 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCC---ACGGTGAG 97915 || |||||||||| | | ||||| ||||| ||||| ||||||||| ||||| Sbjct 196052 GTTGCGCACGCCGACCTTGGACATCTTGCGGTAGCGGTCTTCCATCTCCTTGACGGT--- 195996 Query 97916 CCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGG 97975 ||| ||||| || |||| | || ||||| || || ||| | || || || Sbjct 195995 CCATTTCAGCGCTACGACGGCCTTCTTCGGATCGGTCACGACGGGCGTGAGCAGATGCGG 195936 Query 97976 GATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCG 98035 || |||| || | ||||||| ||||||||| ||||||||||| || | | | Sbjct 195935 AATGCCGTCATAGATCGACAGTTCCAGCATCTTCGGATCGATCATGATCAGGCGGCACTG 195876 Query 98036 ATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCC 98095 || || | ||||| |||| || | | ||| | ||||||| ||| || || Sbjct 195875 TTCCGGGGTCATGCGGTAAAGCAGCGACAGGATCATGGTGTTGATGGCAACGGATTTACC 195816 Query 98096 CGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAG 98140 ||| ||||||| || || |||||||| || ||||| || ||||| Sbjct 195815 CGAGCCGGTGGTACCTGCAACCAGCAGATGCGGCATCTTCGCCAG 195771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351429100475248