Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_026586.1 Length=66299 Score E Sequences producing significant alignments: (Bits) Value seq1548 87.8 8e-13 >seq1548 Length=720 Score = 87.8 bits (96), Expect = 8e-13 Identities = 133/187 (71%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 13224 CCAACCAGCACCAGAGACTCGAAATCGAATCGATGATCGTGGATGGCCGAGTGATTGAAG 13283 || |||| ||| | ||| ||| | ||| || ||||||||||| || ||| | ||| Sbjct 383 CCCACCAAGACCCGCGACATGAAGTTGAAGCGGTGATCGTGGATCGCGGAGCTTTCAAAG 324 Query 13284 CAAAGCCGACGCGGCAGCTCCGGGTGCCAAACATGGAGGCGACCG--GCC-GGAAGTTGG 13340 || || ||||| | ||| |||||||| ||||| ||||| | ||| || ||| Sbjct 323 CAGGCGCGGCGCGGTAACTCAGGGTGCCAGACATGCAGGCGCTGGTTGCCTTCCAGCTGG 264 Query 13341 ACCTGAATGAACCCCAGGCCGTGCAGAGTGATCTTGTCCTTCATCGGGTCATGGACGGTG 13400 ||||| | || |||||||||||||| ||||||||||| |||| ||| | | | || Sbjct 263 ACCTGCACAAAGCCCAGGCCGTGCAGGGTGATCTTGTCGGTCATTACGTCGTCTATGATG 204 Query 13401 CTCATGG 13407 |||| || Sbjct 203 CTCACGG 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 212011910895640