Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_027298.1 Length=36814 Score E Sequences producing significant alignments: (Bits) Value seq4983 401 1e-107 seq3067 398 2e-106 seq3974 318 1e-82 seq2008 154 3e-33 seq7019 140 8e-29 >seq4983 Length=2572 Score = 401 bits (444), Expect = 1e-107 Identities = 638/904 (71%), Gaps = 26/904 (3%) Strand=Plus/Plus Query 20447 TCAGCGCGGCATTCGTCGCGATCAAAACCATCTTCAACAACGCCTTCGGGGCAGCCCCCA 20506 |||| || || ||||| || | |||||| | ||||| |||||||| ||| | || |||| Sbjct 60 TCAG-GCAGCTTTCGTTGCTCTGAAAACCCTTTTCAATAACGCCTTTGGGTCTGCACCCA 118 Query 20507 CCACCTGGCAGAAGATCGCCATGGAAGTGCCGAGCAACACCGGCAGCAACGATTACAAGT 20566 | | ||| | |||||||||||| | ||||| |||| ||| ||||||||| || | Sbjct 119 GCTCTTGGGAAAAGATCGCCATGAAGGTGCCAAGCACCACTGGCAGCAACATGTATGCCT 178 Query 20567 GGCTGAGCGCCTTTCCGAAGATGCGCCGCTGGATCGGCGCGAAGGTGGTCAAGAACCTGA 20626 ||||| || ||||||||||||||||| ||| | || ||||| || |||||||| | Sbjct 179 GGCTGTCGGCGTTTCCGAAGATGCGCCGTTGGGTTGGTGCGAAACACGTTAAGAACCTCA 238 Query 20627 AGGCCTACAAATACGTTGTCGAGAACGAGGACTTCGAAGCCACCGTCGAGGTGGACCGCA 20686 | || | || ||| || || ||||| ||||| ||||| || ||||| || ||||| | Sbjct 239 AAGCGTTCAGCTACACCGTGGAAAACGAAGACTTTGAAGCGACTGTCGAAGTAGACCGTA 298 Query 20687 ACGACATCGAGGACGACCAGCTCGGCATCTACTCGCCCCAGGCGCAGATGGCCGGTTTCT 20746 || ||||||| ||||| ||| | ||||| || ||||||||||||||||||| || || | Sbjct 299 ACCACATCGAAGACGATCAGTTGGGCATTTATGCGCCCCAGGCGCAGATGGCTGGCTTTT 358 Query 20747 CGGCGGCGCAACTCCCGGACGAACTGGTCTACGAAGCGGTCAACGGTGCCTTCACCAAGC 20806 |||| || | ||||| ||| | || | ||| ||| ||||||| ||| ||| | Sbjct 359 CGGCAAAGCGGTTGCCGGATGAAATCGTATTCGAGCTGGTGAACGGTGGCTTTGGCAACC 418 Query 20807 TCTGTTTCGACGGCCAGTATTTCATCGACACGGACCACCCTGTCGGTGATGCCTCGGTGA 20866 | || | |||||| ||||||||| | || || ||||| |||||| || | || | Sbjct 419 TGTGCTACGACGGTCAGTATTTCTTTGATACAGACCATGTCGTCGGTAGTGGCAGCGTCA 478 Query 20867 GCAACAAGGGCACCGCTCCGCTTTCCAACGCCAGCCAGGCGGCGGCGAAGGCAGGTTATG 20926 ||||||| ||||| || | || |||| | | | |||||| || || ||||| |||||| Sbjct 479 GCAACAAAGGCACTGCGGCACTCTCCATCACGACCCAGGCAGCAGCCAAGGCCAGTTATG 538 Query 20927 GCGCTGCTCGCACTGCGATGAAGAAGTTCAAGGACGAGGAAGGGCGTTCCCTCAACGTCT 20986 |||| || || || || ||| |||||||||||||| || || || | || | || Sbjct 539 GCGCGGCACGTACCGCCATGGGCAAGTTCAAGGACGATGACGGCCGCCCGCTGGATGT-G 597 Query 20987 CCCCCAAC-GTGCTCCTGGTCGGCCCGGCGCTGGAAGACGTGGCGAAGATGCTGCTCACC 21045 | ||||| | ||||||||||| || | ||||||||| || | || || Sbjct 598 CGTCCAACAATCCTCCTGGTCGGGCCTGGCCTGGAAGACACCGC----ACGCGCCTTGTT 653 Query 21046 AACCCGAAGCTCGC--GGACAACACCCCG---AACCCCTACGTCGGCACTGCTGAGCTGG 21100 ||| | | |||| ||| || | | |||| |||| ||||| || ||||||| Sbjct 654 GACCAG-TGATCGCCTGGAAGACGGCAAGGTCAACCTCTACAAGGGCACCGCCGAGCTGG 712 Query 21101 TAG--TGGACGGGCGGATCGAGTCCGACACCGCCTGGTTCCTGCTGGACACCACCAAGCC 21158 | | | ||| || ||| |||||||| |||||||| || |||||||||| |||||| Sbjct 713 TTGTCTCGAC--TCGCATCACTTCCGACACGGCCTGGTTTCTTCTGGACACCAGCAAGCC 770 Query 21159 GGTAAAACCGTTCATCTACCAGCCCAGGAAGAAGCCGGTATTCGTTTCCCAGGTCAACCT 21218 || || |||||||| ||| | || ||||| ||||| ||| | ||| Sbjct 771 CGTGCGCCCCTTCATCTATCAGGAGCGCAAAGCCCCGGTCTTCGTCCAGCAGACCGACCC 830 Query 21219 GGATTCGGATGACGTCTTCAGCCTGCGCAAG---CTGAAGTTCGGCGCCGAGGCCCGCGC 21275 || | ||||| ||||||||| |||||| | |||||||| || || || || || Sbjct 831 CGAAGCTGATGATGTCTTCAGC---CGCAAGAAATTCAAGTTCGGGGCAGAAGCGCGAGC 887 Query 21276 TGCTGCCGGTTACGGCTTCTGGCAACTGGCCTATGGCTCCACCGGCACTGGCGCATAAGG 21335 |||| ||||| || |||||||||||||| | ||||| || ||| | || ||||| Sbjct 888 GGCTGGTGGTTATGGTTTCTGGCAACTGGCTTTCGGCTCGACTGGC---GAAGCGTAAGG 944 Query 21336 GGGC 21339 |||| Sbjct 945 GGGC 948 >seq3067 Length=6736 Score = 398 bits (440), Expect = 2e-106 Identities = 897/1325 (68%), Gaps = 46/1325 (3%) Strand=Plus/Minus Query 5898 GCCTGGGGCGAGCGTCCGCCTGTCTTCGTCCAGCTGCTGGCCGCCGAGGTGGCCCGCAGC 5957 || |||||| || |||| | ||||| | ||||| |||||||| || || || | Sbjct 5466 GCTTGGGGCCAGGACGCGCCGTTGTTCGTACGCCTGCTCGCCGCCGAAGTCGCTGCCACC 5407 Query 5958 AGCCAGACGAAGGCCGGCGAGGCAATCGGCATGAGCCGTTCGACCGTCAGCACCATCCTC 6017 | | |||| |||||| || || |||||||||||||| || |||||||| | ||| Sbjct 5406 AACAAGACCAAGGCCAGCCAGCGTATCGGCATGAGCCGCACGGCCGTCAGCCTGACCCTT 5347 Query 6018 GCCAACCGCTACCCGTCGCCCTCGACGATCCGCGTCGAGCGTCGTGTCCTGGCCGCGCTG 6077 |||||||||| |||||||| | | | || ||||| || || ||| | ||| Sbjct 5346 TCCAACCGCTATGCGTCGCCCAGCATGGCGGGTGTTGAGCGGCGGGTAATGGAAACCCTG 5287 Query 6078 AGCCGCATTGAGTGCCCGGCCCTGGGCGAGGCGGTGACCTCGGTCGAGTGC---AGCGAG 6134 | |||||||| || ||||||| |||| | || ||| ||| | ||||| ||| Sbjct 5286 GGGCGCATTGAATGTGTCGCCCTGGACGAGACCGTTACCACGGACCAGTGCCAAAGC--- 5230 Query 6135 TACCTCCAGCGGCCGGCGCCGCTGAACAACCCCGTCGCGATGCGCTGCTGGAAAGCGTGC 6194 |||| | | ||||| || ||||||| ||||||| |||| || ||| Sbjct 5229 TACCGCGAAAAACCGGCCCCCACCCACAACCCGCAGGCGATGCAGCACTGGCGCGCCTGC 5170 Query 6195 CGCGCCTGTCCACGCAACCCGCA-TACCGCCCCCATGA-AACGAG-AGGAACGAGGTCAT 6251 | ||| ||| |||||| | | | || ||| || |||| | | || ||| Sbjct 5169 CAACACTGCCCAATCAACCCCGACTGCTGCAACCAGGAGAACGCCCATGCTCGCCTCCAT 5110 Query 6252 GAGAACCGCATTGCCCTTGAAAGTCTTGACGCCTGACTTGGCCCTGAGCCTGCGCACTTT 6311 | |||||| || ||||||||| |||| || |||| | ||||| || Sbjct 5109 TA--ACCGCAC-GCAATTGAAAGTCCTGACCCCAACGCTGGCAGACCGTCTGCGGGTGTT 5053 Query 6312 CAACGATGCCGCCCGGCTGCTCCAGCGCATGGGGGTCCGCCTTCATCGCCTGGAGCCGAC 6371 ||||| |||||||| | ||| | || |||| | || || | | ||| | Sbjct 5052 CAACGCCGCCGCCCGCAACTTGCAGGCCCACGGCATCCGTGTGCAGGGCTTTCATCCGGC 4993 Query 6372 AGAGGGGCGCGTGACCATCGCCGCAGATGACGCCCGCCGGCTCCTGGAGAA---AGGC-- 6426 || ||| || || | |||| | | | | || |||| || |||| Sbjct 4992 TGATAACCGCCTGGTGATAACTCCAGAAGCGG---GTCAGCGCCTGATCAACCTAGGCCA 4936 Query 6427 TACCTGATGGGCTTCCAGCGCGACGCCTCGGCTGGCAGCACTCGTTACATCACCCGCTTC 6486 |||| || ||||| || ||| | | | |||| || ||||| |||| | | | ||| Sbjct 4935 TACC-GA-GGGCTATCAACGCCATGGCACGGCCGGTAGCACCCGTTTCTACGTGCAGTTC 4878 Query 6487 CAGGGCATCACCCTGGCCTGGAGCGAACCGATCAGCTAC-CGCGACTTCGCCGGCAGCAA 6545 |||||| | ||||||| ||| ||||||| |||||| | | || | | |||| | | Sbjct 4877 CAGGGCGTGACCCTGGAGTGGCGCGAACCCATCAGCGCCTCCCGTCCT-GCCGACTGGT- 4820 Query 6546 CCCCGTAA-----TTCACTGAAAAGGACTACC---CCATGA----ACGACGTACATATCC 6593 | ||| | | |||||| ||| ||| | |||| || || || ||||| Sbjct 4819 -CGCGTCAGACTCTCCACTGA---GGA--ACCTTGCAATGACACAACAACAAAC-TATCC 4767 Query 6594 CCGAGGGCTACCGGATGGACGGGCAAAAGCGCCTGATCCCGGAGGCCACCATCAAGCCCG 6653 || | ||||| || | |||| ||||||||| ||||||||||| || |||||||| Sbjct 4766 CCAAAGGCTATCGCGTCGACGCGCAAAAGCGACTGATCCCGGAAAGCATGATCAAGCCTA 4707 Query 6654 TTGACCTGGCCCGCGACCAGTTGGTTATGGAGCTGGTGGGCAAGGCCAAGGCAGTCCAGA 6713 | ||||||| || || ||||| | | ||||||| || ||| || | |||| Sbjct 4706 TCGACCTGGAGCGGGATGCCTTGGTGCTTGGCCTGGTGGAAAAAGCCCGCGCCG-CCAGC 4648 Query 6714 G-CGAGCTGGCCCGCTTCAAGGCTTCCGCGTTCGGCGACATCGACGCTTTCGTCGATCTG 6772 | || |||||| |||||||| || || ||||| || || || || || ||||| || Sbjct 4647 GACGTGCTGGCGAAATTCAAGGCCTCGGCTTTCGGTGATATTGAAGCCTTTGTCGAACTC 4588 Query 6773 TCGGTCGAGCAGTACGGCACCAAGCTGGGAGGCAAGAAAGGGAACGTCTCCCTCCTGAGC 6832 | ||||||||||||| || || | || || ||||| || || ||| ||| | ||| Sbjct 4587 AGCGCCGAGCAGTACGGCGCCCAGATCGGCGGGAAGAAGGGAAATGTCAGCCTGATCAGC 4528 Query 6833 TTCGATGGCCGCTACATGATCAAGAAAGCGATCCAGGAAACCATCCAGTTCGACGAGCGT 6892 |||||||| || | || ||||| | || | ||||||| |||| |||||||| || Sbjct 4527 TTCGATGGGCGTTTCAAGATCATGCGTGCCGTACAGGAAAGCATCGCTTTCGACGAACGC 4468 Query 6893 ATCCAGGCCGCCCGCGAGCTGATCGAGGAATGCCTTCGCGACTGGACCCAGGGCGCCAGG 6952 ||||||| || || | |||| || |||||||| || ||||||||| || || | Sbjct 4467 CTCCAGGCTGCGCGGGCATTGATTGACGAATGCCTGCGGGACTGGACCACCGGGGCACGC 4408 Query 6953 CCCGAAGTGGTCACCCTGGTAACCAACGCTTTCCGCACTGACACGAAGGGCGAAATCCGT 7012 |||||||||||||| ||||||| | || ||||| |||||| || ||||| ||||| Sbjct 4407 CCCGAAGTGGTCACGCTGGTAAATGATGCCTTCCGGACTGACCAAAAAGGCGACATCCGC 4348 Query 7013 ACCGCCCGAGTGCTCGCCCTGCGCCGCCTGGACATCCAAGACGAGCGCTGGCTGCGAGCC 7072 || ||||| || || || ||||||| |||| || || || ||||||| ||| ||| Sbjct 4347 ACAGCCCGCGTCCTGGCGTTGCGCCGTATGGAAATTACCGATGAACGCTGGCAGCGCGCC 4288 Query 7073 ATGAATGCGATTGGCGACGCCTGCCAGGCGGTGGGTTCCAAGGCCTACATCCGCGTCTAT 7132 ||| | || || |||||||||||||||| ||| || |||||| ||||||||||||| ||| Sbjct 4287 ATGCAAGCCATCGGCGACGCCTGCCAGGTGGTTGGCTCCAAGTCCTACATCCGCGTGTAT 4228 Query 7133 GAACGGGTCGGCGACAGCGACCAGTACCAGCAGATCAGCCTCGATATGGCGGGGGTGTGA 7192 | || || || || | |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct 4227 CAGCGTGTTGGTGATACCGACCAGTACGAGCCCATCAGCCTTGATATTGCGGGGGTGTGA 4168 Query 7193 TATGG 7197 |||| Sbjct 4167 CATGG 4163 Score = 141 bits (156), Expect = 2e-29 Identities = 224/321 (70%), Gaps = 9/321 (3%) Strand=Plus/Minus Query 9078 AAAATCCACATCGCCAAGACCCAGCTCGGCATGGACGATGACACCTATCGCGCATTGTTG 9137 || |||||||||||||||| | || || |||| || || ||||| || || |||||| Sbjct 1953 AAGATCCACATCGCCAAGAAGGACCTTGGGCTGGATGACGAAACCTACCGGGCCTTGTTG 1894 Query 9138 GCCCGCGTCGCGGGCGTGCGCTCTGCCAAGGACTTGGGGCCGCGCCAAGTGGGCAAGGTG 9197 | |||||| ||||| ||||| || ||||| ||| || ||| ||||| | ||| || Sbjct 1893 GGCCGCGTGGCGGGTGTGCGTTCGGCCAAAGACCTGACGCCACGCCAGATCGGCGCTGTA 1834 Query 9198 CTGGCCGAGTTCCAGCGCCTGGGCTGG------AAACCGAAGAGCAACCGGCAAGGCCGG 9251 ||||||||||| ||| |||||||| ||||||| | || ||||||||| Sbjct 1833 CTGGCCGAGTTTGCCCGCTTGGGCTGGGAGTCTAAACCGACTAAAAA---GCAAGGCCGC 1777 Query 9252 GAGACGCCAAAAGTTCCGCAAAACCGGCAAACCGTGCTGCGCAAAATCACCGCACTGCTG 9311 || || | | ||| | ||||| || || || | ||||| || | || Sbjct 1776 AAGGGACCGATGGCGGCGCCAGACCGGGTAAAGCTGGTGGGTAAAATAGAGGCTTTTCTC 1717 Query 9312 GCCAGCGCCCATCGCCCCTGGAGCTACGCCGACCACATGGCCCGGCGCATGTTCCAGGTC 9371 ||| ||| | ||| ||||| || |||||| ||||||| |||||||||| ||||| Sbjct 1716 GCCGAGGCCAAACGCTCCTGGGCATATGCCGACGGTATGGCCCTGCGCATGTTCAAGGTC 1657 Query 9372 GAGCGGGTCGAGTGGCTGGAC 9392 ||||| || || ||||| ||| Sbjct 1656 GAGCGAGTGGAATGGCTAGAC 1636 Score = 129 bits (142), Expect = 1e-25 Identities = 178/247 (72%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 8074 ATGGAACCCAACAAAGCCCTGGAAAAAATCAAGAAACTGCTTCGCCTAGCAGGCAGCAGC 8133 ||||| | | ||||||||| || ||||||||||| ||||| ||||| |||| ||| Sbjct 2974 ATGGACCAGAGCAAAGCCCTAGACAAAATCAAGAAGCTGCTGCGCCTGGCAGCTAGCGAT 2915 Query 8134 AACCCACACGAAGCGGCGGCCGCCATGCGCCAGGCGCGGGCGATGATGGAGAAACACGGC 8193 ||||| |||||||| || || ||||||| |||||| || || ||||||| || || || Sbjct 2914 AACCCGCACGAAGCTGCCGCAGCCATGCACCAGGCCCGCGCCTTGATGGAAAAGTACCGC 2855 Query 8194 ATTGGCGAGAGCGATATT--GCTCTGGCTGACGTCACCGAACACGGCACCGGTAGCGGCT 8251 ||| ||| |||||| ||||| | || || |||| || | || ||||||| | Sbjct 2854 CTTGAAGAGTCGGATATTCAGCTCT--CCGAGGTATTCGAATGCGCCGCCCGTAGCGGTT 2797 Query 8252 CCAAACTGAAGCCCGCGCAGTGGGAAGCTAATCTCGGCGGCACCGTCGCGAAGGCATACT 8311 | || ||| || |||| |||||||| || || | || | ||| | |||| ||| Sbjct 2796 CAAAGATGACCCCGCCGCAATGGGAAGCCAACCTGGTGGGTGCAGTCACCCAGGCCTACG 2737 Query 8312 CCTGCAA 8318 ||||||| Sbjct 2736 CCTGCAA 2730 Score = 120 bits (132), Expect = 7e-23 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 8399 TGCTGCGCCAGGTGCGCAAGGCCCGCCGCGACTACATCGCCACCGAGCTTAAGCGCTGCA 8458 |||| ||||| || ||| || ||||||| |||| ||| | || || | |||||||||| Sbjct 2671 TGCTACGCCAAGTCCGCCAGTCCCGCCGTGACTTCATTGGAACGCAGTTGAAGCGCTGCA 2612 Query 8459 AGGCCTCCACCAAAACCAAGCGTGGCGACCTGTTCTGCGACGCCTGGGTGTGGTCGGTGC 8518 || | | ||||| |||||||||| |||| ||||||| | ||||||||||| | |||| Sbjct 2611 AGCCTGCTACCAAGACCAAGCGTGCCGACGTGTTCTGTGGCGCCTGGGTGTCAGCAGTGC 2552 Query 8519 GTAAGCAGGTCAATCAGTTCGCCGGGAGTGCGCAGCCGTCGCTGGCAGCCGAGGCGTACA 8578 | ||||||| ||| || || | | |||| || | |||| | | |||||||| Sbjct 2551 GCCGACAGGTCATGGCGTTTGCTGGCAACGATGAGCCTTCACCGGCAACAGCGGCGTACA 2492 Query 8579 TGGTGAAGCACCACCCCGA 8597 || | |||||||| |||| Sbjct 2491 TGCTTAAGCACCATTCCGA 2473 Score = 96.9 bits (106), Expect = 8e-16 Identities = 265/399 (66%), Gaps = 14/399 (4%) Strand=Plus/Minus Query 4617 ATCCTGGGTGAAATGGGCATCAAGCCGGCCGGGACCATCCCGGAAATGGCCGACCAGATC 4676 ||||| | || ||| ||||| | |||||| |||||| ||| |||| |||||||||| Sbjct 6602 ATCCTTCGCGAGATGAGCATCCAACCGGCCCCGACCATGTCGGTGATGGTCGACCAGATC 6543 Query 4677 GCCGAGGAACTGGCCGCCAGCGGCCGCCCGCTGATCATCGACGAAATGGACCACCTGGTC 4736 || ||| | || || ||||| ||||||||| | |||||||| || | ||||| || Sbjct 6542 GCTGAGCAGTTGTCCAAGAGCGGGCGCCCGCTGTTGATCGACGACGTGCAATACCTGCTC 6483 Query 4737 ------GCCGCTGGCCAGGTCGAGCTGATTCGTGATCTGTACGAGTCCAGCCAAGCCTCC 4790 |||| | |||| || |||| || ||| ||| | ||||| ||| || Sbjct 6482 GAAAAAGCCG-TAGCCA--ACGTCCTGA-CCGACATC--TACAACGCCAGCGAAGGGACC 6429 Query 4791 ATCTTGCTGATCGGCGAGGAAATGCTGCCGACCAAGCTGAAGAAGTTCGAACGCTTCCAT 4850 || | ||||||||||| ||| |||| | ||| |||| | |||||| | ||| Sbjct 6428 ATTGTCCTGATCGGCGAAGAACGTGTGCCCGGTAGCCTGGCGAAGCTGGAACGCCTGCAT 6369 Query 4851 GGCCGCGTGCTGAGCTGGGTTCCGGCCCAGCCAGTGTCTCTGGAGGACGCCCGCAACCTG 4910 ||| |||||| ||||| || || |||| | | ||||| || ||| |||| Sbjct 6368 AACCGGGTGCTGGAGTGGGTACCTGCGCAGCGCGCCACCCTGGACGATCTGCGCGCCCTG 6309 Query 4911 GCGCCGGTCTACAGCCCCGGAGTGGC-TATCGCTGACGATCTGCTCGCGCACCTGGTGAA 4969 || | ||| | |||||| | || ||||||| ||| |||| | ||||| || Sbjct 6308 GC-CGAGTCAAGCTACCCGGAATTGCACTTCGCTGATGATTTGCTGGATGACCTGCGCAA 6250 Query 4970 GAAGTCCCTGGGCTCTGTCCGTCGCGTCGCGGTGAACCT 5008 |||| |||| | ||||| || ||||| ||||| Sbjct 6249 GAAGGTGAATGGCTGCCTGCGTCGTGTAGCGGTCAACCT 6211 Score = 80.6 bits (88), Expect = 6e-11 Identities = 58/66 (88%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 7999 GCGAAACCGCCCCGGCCTGGCCGGGACGGTCTGCCGGACGTGGTGGTCCGGTACTGACGA 8058 |||||| ||||||||| | | ||| |||||||||||||||||| |||||||||||| || Sbjct 2324 GCGAAATCGCCCCGGCGCG-CTGGGGCGGTCTGCCGGACGTGGTTGTCCGGTACTGATGA 2266 Query 8059 GCAGCC 8064 |||||| Sbjct 2265 GCAGCC 2260 >seq3974 Length=4040 Score = 318 bits (352), Expect = 1e-82 Identities = 1074/1651 (65%), Gaps = 76/1651 (5%) Strand=Plus/Minus Query 189 GCCCAAACCACGCGCCCGACAATATCCAGGTCTTGTAACTGATCTTTGGGGACAGTCATT 248 ||||| || ||||| || | || |||||||| | |||| ||| |||||||| ||| Sbjct 3751 GCCCATACTACGCGGCCAATTATCTCCAGGTCGTTCAACTTATCCCTGGGGACAACCATA 3692 Query 249 TCTGTGTACGCCCGATTCTCGCTTATGATCGCAATCGATCCGTCAAACCTACGCTGTAGG 308 || ||| ||| ||||| || ||||| ||| || ||||| ||| ||||| || Sbjct 3691 TCGCGGTAGGCCTTGTTCTCACTGATGATGTGAATAGACCCGTCGAACTGCCGCTGGAGC 3632 Query 309 CGCTTGGCATACAGGTGATCCTGGAGGCGGATGACGTAAACAGCCTCGTCCCGTACCTCT 368 | || ||||| || || || | || ||||||||||| |||||||| |||| | Sbjct 3631 CTTTTCGCATAGAGATGGTCATCCAGCCGGATGACGTATACAGCCTC-TCCCTCAAG--- 3576 Query 369 CGATATG----TGTGGTCAACCAGGACGGTATCCCCATCGGACAACAACGGCTCCATTGA 424 ||| || ||||||||| || || ||||| |||||| | | |||||| || Sbjct 3575 CGAGCTGCGGCTGTGGTCAATCATCACAGTATCGCCATCGCTTAGAAGTCCCTCCATCGA 3516 Query 425 GTCGCCGCCAACGCGGACAGCTGAGAGGTTATCGGTGTCGAGCCCCTTCTTTCTCAGGCT 484 || ||| | || |||| || || || | | ||| || || | ||| | || Sbjct 3515 ATCCCCGTCCACTCGGATTGCGGACAGTCGCGCAGAGTCCAGGCCTTGCTTGCGAAGCGA 3456 Query 485 GTACTTGGTAAACGCCAGCTTCGTCAGTTCTCGGGCTCCCTCTGTCCAGGAGCCATGCCC 544 |||| ||| ||||| |||| || || | || || || |||||| ||| || || Sbjct 3455 GTACGCGGTGAACGCAAGCTGGGTTAGGACAGTAGCCCCTTCGCTCCAGGCGCCGTGTCC 3396 Query 545 CGCGCTTACCTTCGTGTCATACAACGGGATGTAGGCATAGTCGGGGGCCGC--TGGGCTA 602 ||| || | | ||| ||||| || | ||| || || | | |||| ||| || Sbjct 3395 CGCACTACAGTGGGCGTCGTACAAAGGCACGTAAGCGTACTTGTCCTCCGCAATGGACT- 3337 Query 603 GCAGCCTCCGGGGACTCGCCCCCCGT--ACTTCTCGATGCACTCTGTTTGCCGGCGATCA 660 |||| | | ||| | |||| || | ||| ||| | | || Sbjct 3336 ----------GGGAAGCAGCTCCCTTCAACTTGTCC---CCCTC-----GCCTGA-AGCA 3296 Query 661 ACCAATCCAAGGAT-ACGCCTGCCGCCTCCGCTATAGCCGCACAGCGGGATGCCTTTGGC 719 | | | |||| | ||||| |||||| || || | |||| || | | |||| ||| Sbjct 3295 AGCCAGCCAATGTCGACGCCGACCGCCTTAGCGATGTCTACACACCGCGCTACCTTGGGC 3236 Query 720 TCGCTATCACCTGTGAGGTAAGCCTCCAAGGTGCTTCGGGGGATAGCCGTTTTCCGGGCA 779 || || | || || |||||| ||| | ||||| ||| |||||||| || || || Sbjct 3235 TCACTCTGCCCGGTCAGGTAATACTCAAGGGTGCGTCGTGGGATAGCGGTAAGTCGCGCC 3176 Query 780 AGGCTATCACCGTTTCCGACTATGTTTGCGCACTCACGAATGCGGGCCGCAAGGCTGTCT 839 | ||| || |||| |||| | ||||| | || || || |||| || | || Sbjct 3175 AACTCATCGCCACTTCCCGCTATCTCAGCGCATTGCCGGATACGTTCCGCCAGCCCTTCG 3116 Query 840 GTCATTTCGCTTTCTCACCTGAGGAATACGAAAC-------CTGGACGAAACTAGGTTTC 892 ||||||||||||||| | |||| || |||||| ||| || || | | Sbjct 3115 CTCATTTCGCTTTCTCCCTTGAGCTATCCGAAACGGCATCCCTGCACAAAGCGAA----- 3061 Query 893 TGATTTCGCATTCCGaaaaaaaCCATACAAATCAACGTAATAGTCAATTTCGGAATCTCG 952 ||||||| ||| | ||| || |||| ||||| | |||| ||| || || | | Sbjct 3060 --ATTTCGCTTTCTCGATAAAGCCTTACAGATCAAAGAGATAGACAAAATC--AACCACC 3005 Query 953 A--ATGCCGAAATTCAGCAAACGAAATTCCGTTTT-CGGTTGATCGGCATTCCGAAAAC- 1008 | | ||| || | | || ||||| || |||| || || | | ||| | | Sbjct 3004 ATCAAGCCAAAGATG-GAAAGCGAAAAGCCATTTTTCGCTTTACCA-CATAGTTATATTT 2947 Query 1009 GACTATGTTTATGCCCTAAGTCACGTTAGACAACCCAAGTAGTCGCCCTGCATGGCGGCT 1068 | |||||||||||||||| || |||||||||| ||||| | | |||| || || | Sbjct 2946 GGCTATGTTTATGCCCTAGGTAACGTTAGACATCCCAAAAAACCACCCTTGCCGGTGGTT 2887 Query 1069 GA-AATGGAACGTAGGCATGAACAGAACCGAAATCCCCCGCGACAACAACGTCCGCTGGG 1127 |||||| |||||||||||| |||||||||||| | ||| | | | || |||| Sbjct 2886 ATGAATGGACGCTAGGCATGAACAAAACCGAAATCCCGCTTGACCCAACCCTGCGATGGG 2827 Query 1128 AGTGGATCAAATACCAGCTCCGCGCCAGGGGTTCGTCCCTGGCCGAGGTGGCCCGCTCCC 1187 | |||||||||||||| || || || | ||| |||| || || |||| || | Sbjct 2826 AATGGATCAAATACCAACTTCGTACCCGAGGTACGTCACTCGCAATCTTGGCGCGTGAAC 2767 Query 1188 TCGACGTATCCAGCC-CGGCAGTCAAAAACGCCAAGCTGAATCCCTACCCTCGGGTAGAG 1246 | ||||| | ||| | || ||||| ||||| |||| | | || || || | ||| Sbjct 2766 TTGACGT-TACAGATGCTGCCGTCAAGAACGCTAAGCGCACCGCATATCCGCGAATGGAG 2708 Query 1247 CGCGCCATCGCTGCTGTACTCGACCTCAGCCCCCTAGTGCTGTGGCCTGAGCGCTGGCTC 1306 || || || || || || | ||||| || | | ||||||| || || ||| | Sbjct 2707 CGAGCTATTGCCCGTGCGCTAGGCCTCAAGCCAATCGACTTGTGGCCCGAACGTTGGAAC 2648 Query 1307 GACGACGAGAATCCGAAGCGGCAACGGCCGAATCGTTCGGAAACCCTCAAGGCATATGAC 1366 | ||| | || | || ||| | | || | ||| | ||| ||| | Sbjct 2647 GCAAACGGCACCCCACACCGTATTCGGGTGCAGCGCGCAGAA---CACAACGCAACT--- 2594 Query 1367 AGTGTCATATGCCGATCCGGGAAAAATACCAGATACGCTGACCAAGCGCAGCGTAAAGCC 1426 || || ||| | | | | || |||| | || || || |||||| || Sbjct 2593 ----TC-TA-GCCAA---GAGCATAAC-CCAGCTTA--TGCCCTTCGACACCGTAAAACC 2546 Query 1427 GACGCGGGGGCTTGAACATGGCCCGCCGCAAAGACGACCGCACCCTGGACATCTTCGATG 1486 | | ||| || | |||||| ||| || || || || || | ||||||||| || Sbjct 2545 GGCACGGAGGTATAAACATGCGCCGTGTAAAGGATGATCGTACGTTAGACATCTTCTCTG 2486 Query 1487 TTCCGCAGCCAGCCCGCGCTATACCCGGCGAGTGCAACTATGCCGCGCAGGTCAGCGAGC 1546 | || ||||||| | ||||| || || | ||||| ||||||| |||||||| || | Sbjct 2485 TCCCACAGCCAGTTCTGGCTATCCCAGGGAATGGCAACAATGCCGCACAGGTCAGTGAAC 2426 Query 1547 TGGTCAGCGAAATTCTGAAGGCCGCCAACCTCGACCGTTACGAGATTGCCGCCCGCATGT 1606 || ||||||| |||||||| | || | || ||||||||||| |||| || ||||||| Sbjct 2425 TGATCAGCGAGATTCTGAAAGGTTCCGATCTGGACCGTTACGAAATTGGTGCACGCATGT 2366 Query 1607 CGCGCCTCTCCGGCGATGACGTGAGCAAGAACATGCTCGACGCCTGGTCGAGTCCCGCCC 1666 | ||| | || |||||||||||||| ||| ||||||| ||||| |||||||| || |||| Sbjct 2365 CTCGCTTGTCTGGCGATGACGTGAGTAAGCACATGCTTGACGCGTGGTCGAGCCCAGCCC 2306 Query 1667 GAGTTGATCACAACTTGCCTTTCTACCGCGCCGCCCTCCTGGAGGACGTCTGCGCGAGCC 1726 || || || ||| |||| ||||| | ||| | || || || || || || || | Sbjct 2305 GAACAGACCATAACCTGCCGTTCTATAGAGCCCCACTGCTTGAAGAAGTTTGTAGCAGTC 2246 Query 1727 ACCTGCTGACCAACTGGCTGGTCGATGTGCGGGGCGGCCGCGTGGCCTATGGCCGAGACG 1786 || | | ||| |||||||||| || || || ||||||||||| || || || || | Sbjct 2245 ACGTTTTAACCGACTGGCTGGTTGAGCAACGTGGTGGCCGCGTGGCTTACGGTCGCGATG 2186 Query 1787 CACTGCTCGCCGAACTGGGCCGCCTGGAGCG 1817 |||| ||| || || || || |||| ||| Sbjct 2185 CACTCAACGCGGAGCTTGGTCGTCTGGCGCG 2155 >seq2008 Length=9006 Score = 154 bits (170), Expect = 3e-33 Identities = 133/162 (82%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 25559 CGATGCAGGAAGCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAGCTGG 25618 ||||||||||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct 711 CGATGCAGGAAGCCACCGGCAAGGCTGTGAGCGAGACTGTCGCCGAGTTCTCCAAGCTGG 770 Query 25619 CCGACGAACCGGTCAAAGCCTC-GCAGCAACTCAACGAGAAATATCACTACCTGACCGCC 25677 | ||||| ||||| || ||||| || || || |||||| | || ||||| ||||| || Sbjct 771 CAGACGACCCGGTAAAGGCCTCTGCTGC-GCTGAACGAGCAGTACCACTATCTGACGGCT 829 Query 25678 TCGGTTTACGAGCAGATAGCCGCCCTCGATCAGCAAGGCGAT 25719 ||||||||| |||||| ||||| || || ||||| |||||| Sbjct 830 TCGGTTTACTCGCAGATTGCCGCACTGGAGCAGCAGGGCGAT 871 Score = 120 bits (132), Expect = 7e-23 Identities = 465/721 (64%), Gaps = 20/721 (3%) Strand=Plus/Plus Query 26506 GACCAGGTCACCGCAGCCTATGAAGGGGAAATCCAGGCGCTGGAGGCGCTGCGCGACAAA 26565 ||| |||| |||||||||||||| | || || ||||||||||| | | ||| Sbjct 1592 GACGAGGTGACCGCAGCCTATGAGGCCGAGATTGCCGCGCTGGAGGCCGTCAAAGGCAAG 1651 Query 26566 AGTTCCACCACGGCGGCCCAGCGCATCAGCCTGGACCAGAAGATCGCCGAGGCCAGGAAC 26625 | ||||| || || |||||| ||||| |||||||||||||||| || || | Sbjct 1652 AAGTCCACGACTGCTGCCCAGAGCATCCAGTTGGACCAGAAGATCGCTGACGCGCGCGCA 1711 Query 26626 AACATGGTCAAGGCGCAGAAGAAGGCCGACGCCGACCTGGAAGTCCT--CCAGCTCAACG 26683 ||||||||||||||||| |||||||| | | || || || | ||| ||||| Sbjct 1712 GGGATGGTCAAGGCGCAGAAAGAGGCCGACAACCAGCTTGAGGTGTTGGCCA--CCAACG 1769 Query 26684 AACAGGGCCGCCTGAAGAAACAGGCCCAGGCAGTCAAGGCCTACAGCGACGCGCTCCAGC 26743 | || |||||| || |||| | | || ||| ||||| | || || | Sbjct 1770 AGACCGGACGCCTGGCCAAGCAGGAACGGTCAATCACCACCTACGTGCAGGCCCTGGCTC 1829 Query 26744 AACAACAGGATGCGCTGGCCCTCCAGGGTCAACGTGCCGCCGCTGCCGTGGGCATGGGCG 26803 | |||||| || |||| || || ||||| || | || ||||||| ||| | Sbjct 1830 AGCAACAGCGAGCCCTGGAACTTGCCGGCCAACGCGCAGTACTTGGCGTGGGCCAGGGGG 1889 Query 26804 --CGCAACAGCGC-CGCTTGTTCGATCAGCGTGGCAGCCTTGACGACCGATTCGCGCAGC 26860 ||| | | ||| | | ||| | | ||||| | ||||| || || |||| Sbjct 1890 ACCGCCAGAACGCACTCAACGGCGAACTG---AACAGCCAGCAAGACCGGTTTGCTCAGC 1946 Query 26861 AGCGCCTGGACCTGGCGAGCCAGTACGGTGACGGCTCGCGAGGCATGAGCCTCGACGAGT 26920 || ||||| |||| | |||| | ||| ||||| |||| || |||| Sbjct 1947 AGTCGCTGGAGTTGGCCAACCAGAAATCCGACCCGTCGCGCAACATGTCGGAGGAGGAGT 2006 Query 26921 ACAA-CGACAAGCTCAAGGCGCT---GGAAGCTAACCATGCCGCGA-TGACCCAGCAGCT 26975 ||| ||| || | | ||||||| || || ||| | ||||| | |||| ||| | Sbjct 2007 TCAAGCGAAAATC-CCAGGCGCTTGCAGATGCGAACAAGGCCGCCACTGAC----CAGAT 2061 Query 26976 GCAACGCAACTACGCCGACCTCCAGGCCGCCCAGGGCAACTGGGTCAACGGGGCGACGTC 27035 | | ||||| || || | || ||| |||||| ||||| || || |||||||| Sbjct 2062 CCGGCAGAACTATGCGGATGTGGAGAACGCACAGGGCGACTGGACGAAGGGCGCGACGTC 2121 Query 27036 GGCGTTCGCTGACTACATCGACTCCGCCAGGGACGTCGCGGGCCAGACCTACGAACTGTT 27095 ||| | || ||||| | || || || | | || | || ||||||||| | ||||| Sbjct 2122 GGCCTGGGCCAACTACCTGGATTCGGCGAAGAACATTGCCGGCCAGACCAAAAGCCTGTT 2181 Query 27096 TAGTAACGCCTTCTCCGGTCTGGAGGATGCCGTCGTTACCTTTGTGACGACTGGCAAGGC 27155 | || |||||| | | ||||||| || || || | ||| | | ||| |||||||| Sbjct 2182 CGGCAATGCCTTCAGCAGCATGGAGGACGCGGTAGTCAACTTCGCAATGACCGGCAAGGC 2241 Query 27156 CTCGCTGGATGACTTCGTCCGCACCATGATTGGCGACCTGGCCAGGATGGCGACCCGCCA 27215 ||| | ||||||| | || ||| ||| ||||| | || || |||||||| Sbjct 2242 ATCGTTCTCGGACTTCGCTAAATCGATCCTTGCAGACATGGCCCGCATTGCTACCCGCCA 2301 Query 27216 G 27216 | Sbjct 2302 G 2302 >seq7019 Length=625 Score = 140 bits (154), Expect = 8e-29 Identities = 264/386 (68%), Gaps = 8/386 (2%) Strand=Plus/Minus Query 20017 GACCGCAACACCCCGCTCCAGGACGCCGAGGTCATCGGCGTGCCGGTAGCGGCCAACGTC 20076 || ||||| || || | ||||| ||||||| | | || || || || || |||||| Sbjct 395 GATCGCAATACGCCAATGAAGGACACCGAGGTGCTGGTGGTTCCTGTCGCCGCTAACGTC 336 Query 20077 CAGGTCTTCGCCGGCGCCATCGTCGTGGCGAACGCTACCGGGTTCGCCGTAGGCGGCAGC 20136 | ||||||| ||| || | | || || | ||| || || || || | | ||| Sbjct 335 CGCATCTTCGCGGGCTCCCTGGCGGTTGCCACCGCCACTGGCTTTGCTGCACCCGGTTCA 276 Query 20137 ACCGCCACCGGCTTGACCTACCTGGGCCGCGCTGAGGAATACGTGGACAACCGCAATGGC 20196 |||||| |||||| ||||||||||||| |||| || || |||||||| ||| Sbjct 275 ACCGCCCTGGGCTTGTCCTACCTGGGCCGTTTCGAGGCATCAGTCGACAACCGAGGGGGC 216 Query 20197 GCGGATGGCGC---CAAGGTCGTCCGCG-TGCGCCGCCTGAACGCCTTCAAGTGGGCGAA 20252 || | ||| || | ||| ||| | | |||| || || ||| ||||| || Sbjct 215 GCCGCTGGTGCTGCCCAGG----CCGAGATCCGCCATGGCAAGGCATTCCTTTGGGCCAA 160 Query 20253 CGACGGCAGCGTCACCCAGGCGCACCTGATGAAACCCGCCTACATCGTGGACGACCAGAC 20312 ||||| | | |||| |||||||||||| | || || ||||||||||| || ||| | || Sbjct 159 TGACGGAACCATCACTCAGGCGCACCTGTTCAAGCCAGCCTACATCGTTGATGACGAAAC 100 Query 20313 CGTCGCCGCCACGGACGGCACCGAAACCCGCTCCCCGGCCGGCCGCATCATCGGCGTCGA 20372 |||||| || | || | || ||||| ||| | ||||| |||||| |||| | || Sbjct 99 CGTCGCGGCTGCTGATGCAGGCGGCACCCGATCCGCTGCCGGACGCATCGTCGGTATTGA 40 Query 20373 ACCGGACGGCGTGTGGGTGGAATAAC 20398 | ||||||| ||||| || |||| Sbjct 39 TACCAACGGCGTTTGGGTTGAGTAAC 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117672335928288