Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq222 102 3e-16 >seq222 Length=228455 Score = 102 bits (112), Expect = 3e-16 Identities = 121/163 (74%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 || |||||||| | || ||||| | || ||||| ||||| ||| | || || ||||| Sbjct 135218 GTAGCTTTTGCAGCCGTAGAAGGTATATTCTTTAGTGGCAGTTTTTGT-TCGATTTTCTG 135160 Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834 |||||||||| | ||| | |||| || |||| ||| || ||||| |||||||| || Sbjct 135159 GTTGAAAAAGAGAGGATTGATGCCAGGATTGACTTTTTCCAATGAACTTATCAGTCGTGA 135100 Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAA 443877 || ||||| ||||| | || |||||| | |||||| | ||| Sbjct 135099 TGAAGGTTTACATTGTAATTTTGCCTGTTTACTCTACTCGAAA 135057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588177794785430