Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq439 107 9e-19 >seq439 Length=55205 Score = 107 bits (118), Expect = 9e-19 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 65116 TAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAA 65175 |||||||||||| || ||||||| |||||| |||||||| || | ||| ||| ||| Sbjct 33313 TAAATTAATATTATTGGAACCAACAAAATTTTGAGCCATACCAACAATAGCTTGTGATAA 33254 Query 65176 ACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAAC 65235 ||| |||||| ||||| ||| ||| ||||| || | ||||||| | ||||||||||| Sbjct 33253 ACTTTGTTCACCATGATGGTATGCTGTGTGTTCTGAAATATATCCAATTAATTGAGCAAC 33194 Query 65236 TTTTATTTC 65244 ||| | ||| Sbjct 33193 TTTAACTTC 33185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235657670351100