Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq1445 104 5e-18 >seq1445 Length=14432 Score = 104 bits (114), Expect = 5e-18 Identities = 274/411 (67%), Gaps = 12/411 (3%) Strand=Plus/Minus Query 21604 TTCGCGCCCGGCTCCGTGTTTCACCTGCTGGAGCCGGATATCAATCAGGAGCTGTACGGC 21663 || || ||||| || | | ||| ||| ||| | |||||||| ||||| | |||||| Sbjct 12332 TTTGCCCCCGGTTCGATCTGCCACTTGCGCGAGGCCGATATCAACCAGGAAATCTACGGC 12273 Query 21664 CTGCCGGAATATCT--CAGCGCCCTTAACTCTGCCTGGCTGAATGAGTCGGCCACGCTGT 21721 |||||||| | || |||||| || || ||| || ||| |||||||||| Sbjct 12272 CTGCCGGAGTGGCTGGCAGCGCTGCAAAGC--GCACTGCTCAACGAGAGCGCCACGCTGT 12215 Query 21722 TCCGCCGCAAGTATTACGAAAACGGCGCTCATGCCGGATACATCATGTATGTCACCGATG 21781 |||| |||||||| ||| | |||||| |||||||| | ||| |||| | ||||| | Sbjct 12214 TCCGGCGCAAGTACTACAACAACGGCAGCCATGCCGGTTTCATTCTGTACATGACCGACG 12155 Query 21782 CCGTGCAGGATCGCAACGATATCGAAATGCTTCGCGAAAACA-TGGTTAAGTCGAAAGGC 21840 | | |||| | | || ||||| || ||| | || || || |||||||| Sbjct 12154 CGGCGCAGAAGGAAGAGGACATCGACTCACTGCGC-ACCGCACTGAAGAACTCGAAAGGG 12096 Query 21841 CGCAACAACTTTAAAAACCTGTTTCTCTATGC-CCCACAGG--GGAAAGCCGACGGCATT 21897 | ||||||| ||||||||| | || || || |||| |||| ||||||||| Sbjct 12095 CCAGGCAACTTTCGCAACCTGTTTGTGTACGCGCCGGCAGGCAAGAAA---GACGGCATT 12039 Query 21898 AAAATTATCCCCCTCAGTGAAGTGGCGACGAAGGACGAtttttttAATATCAAAAAAGTC 21957 | | ||||| | || || || ||| | |||||||| || |||||||| || Sbjct 12038 CAGCTCATCCCGGTGAGCGAGGTTGCGGCCAAGGACGAATTCAGCTCGATCAAAAACATC 11979 Query 21958 AGCGCCGCAGATCTCCTGGACGCACACCGCATCCCCTTTCAGTTGATGGGC 22008 ||| | ||||| || | || ||||| || |||||||||||| Sbjct 11978 AGCCGTGACGATCTGCTCGCGGCGTTGCGCATTCCACCGCAGTTGATGGGC 11928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104428758638556