Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq615 96.9 4e-15 >seq615 Length=7886 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 137070 ACATTATTAAGATCAGTACCTGCTGCTGTGCCTGGTATTGTATTCTTATCTGGTGGATTA 137129 |||||||||||| | || || ||||| | || |||||||| ||||||||||| ||| | Sbjct 4223 ACATTATTAAGAACTGTCCCACCTGCTTTACCAGGTATTGTTTTCTTATCTGGAGGACAA 4282 Query 137130 AGTGAAGAAGAAGCATCTCTATATCTAAATGAGATGAATATTCTAAGTGTTGATAAACCA 137189 ||||| ||||| ||| | || | || | |||||| | ||| | |||| Sbjct 4283 TCTGAAGTTGAAGCCACTCAAAATTTGAACGCCATGAATTT------AGTTCCAAGACCA 4336 Query 137190 TGGAATGTATCATTCTCATATGGTAGAGCACTACAACACTCTTGCCTAAAAGCATGGAGT 137249 ||| | || ||||||||||||||||| ||||| || | ||||||||||| || Sbjct 4337 TGGTCACTCTCCTTCTCATATGGTAGAGCTTTACAAGCATCCATCTTAAAAGCATGGGGT 4396 Query 137250 GGTGGTAA 137257 |||| ||| Sbjct 4397 GGTGATAA 4404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631365841061840