Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq1822 98.7 2e-15 seq3623 84.2 4e-11 >seq1822 Length=14309 Score = 98.7 bits (108), Expect = 2e-15 Identities = 70/79 (89%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 294859 TATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTA 294918 |||||||||| || ||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 443 TATGGTGCCGGCACCAGGAGTCGAACCCGG-GACCTACTGATTACAAGTCAGTTGCTCTA 385 Query 294919 CCAGCTGAGCTATAACGGC 294937 ||| |||||||||| |||| Sbjct 384 CCAACTGAGCTATACCGGC 366 >seq3623 Length=1064 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1031 ATCCCATGGCACATCCCCGAAGACTTCAAATGGTTCAAAGAGAAAACCTTGGGCCATCCA 1090 || || ||||| | || | || ||||||| ||||| | | ||||||||| | || Sbjct 267 ATGCCCTGGCATTTGCCGGGGGATTTCAAATATTTCAAGGCCACTACCTTGGGCAAGCCG 208 Query 1091 GTGATCATGGGTCGTAAGACCTGGGAATCCATTGGTCGTCCTTTGCCGGGTCGTCTGAAT 1150 | |||||||| || ||||||||||| ||| | || || || |||||||| || |||| Sbjct 207 ATCATCATGGGGCGCAAGACCTGGGATTCCCTGGGGCGACCGTTGCCGGGCCGGTTGAAC 148 Query 1151 ATCGTGGTCAG 1161 || |||||||| Sbjct 147 ATTGTGGTCAG 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989235857965422