Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_029003.2 Length=29733 Score E Sequences producing significant alignments: (Bits) Value seq1445 147 4e-31 >seq1445 Length=14432 Score = 147 bits (162), Expect = 4e-31 Identities = 237/341 (70%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 432 AAGTCATCCTTTGTGGCGACTTCGCTCAATGGCACGATTTTGATGCCGTCCGGTTTTCCG 491 || || ||||| | || || ||||||| || | || | |||||||| || || Sbjct 11998 AATTCGTCCTTGGCCGCAACCTCGCTCACCGGGATGAGCTGAATGCCGTCTTTCTTGCCT 12057 Query 492 CCGGGAGCGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCCTTTCGAGTTACGCATCGCC 551 | || ||||| | ||||||||| ||||||||| ||||||||||||| || || Sbjct 12058 GCCGGCGCGTACACAAACAGGTTGCGAAAGTTGCCTGGCCCTTTCGAGTTCTTCAGTGCG 12117 Query 552 TCGCGCAGCGATTCGACGTCGGTCGCGCTCTGCGCCGGGTCAGTCACATACATGATGTAA 611 |||||| || |||| ||| | ||||||||| ||| |||| |||| ||| || Sbjct 12118 GTGCGCAGTGAGTCGATGTCCTCTTCCTTCTGCGCCGCGTCGGTCATGTACAGAATGAAA 12177 Query 612 CCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGCGTCGCGGATTCATTCAGC 671 || || || |||||| | ||| |||||||| ||||||||||| ||| || || ||| Sbjct 12178 CCGGCATGGCTGCCGTTGTTGTAGTACTTGCGCCGGAACAGCGTGGCGCTCTCGTTGAGC 12237 Query 672 CATGCGGAATTAAGCGCGCTGAGATATTCAGGCAGGCCGTAAATCTCCTGATTAATATCA 731 |||| | ||||| || | || ||||||||||| || ||||| || ||||| Sbjct 12238 AGTGCGCTTTGCAGCGCTGCCAGCCACTCCGGCAGGCCGTAGATTTCCTGGTTGATATCG 12297 Query 732 GGCTCCAGCAGGTGGAACACGGTATCGGGTGCGAACTCATG 772 | ||| ||| |||| | | | | |||| || || ||||| Sbjct 12298 GCCTCGCGCAAGTGGCAGATCGAACCGGGGGCAAATTCATG 12338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95015227740660