Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_029057.1 Length=134742 Score E Sequences producing significant alignments: (Bits) Value seq19 104 2e-17 >seq19 Length=72038 Score = 104 bits (114), Expect = 2e-17 Identities = 187/266 (70%), Gaps = 8/266 (3%) Strand=Plus/Plus Query 73423 GTTAGTATAATGATATGGTTATTAC--ACATC-ATCTTACGTCCTTGGTTATCTGTGATA 73479 |||| ||||| || || |||||| | ||| ||||| | ||||| |||| ||||| Sbjct 58597 GTTAAAATAATCAT-TG--TATTACGGAAATCGATCTTTCTACCTTGACTATCGGTGATG 58653 Query 73480 TGACCTTCATCAAACATTTGAAGCAAGAGGTTGTAAACACTTGGATCAGCTTTCTCCACC 73539 ||||||||||| || ||||| || || || ||| | || ||| |||||| || | Sbjct 58654 TGACCTTCATCCAAAATTTGGAGTAATAGATTGGATACTTCACGATGAGCTTTTTCAAAT 58713 Query 73540 TCATCACCCAAGATAATACCAGAGGGATTTCGACTTAACCACT-CTGTAAGTAATCCACC 73598 |||||| ||| | | | | | ||| || || ||| || |||| ||| |||||| Sbjct 58714 TCATCAAACAATACCAAAGAATATGGACGTCTTCT-AACAGCTTCTGTGAGTGTTCCACC 58772 Query 73599 TTCTTCATAACCAACATAACCACTTGAGGAACCAATCAGTTTATTTACTGCAGTTTTATC 73658 ||||||||| ||||||||||| || | |||||||| | || | || | ||| || Sbjct 58773 TTCTTCATATCCAACATAACCTGGTGGTGCACCAATCAATCTACTAACAGAGAATTTCTC 58832 Query 73659 TGAATATTCACTCATATCAAGACGAA 73684 ||||||| |||||||| ||||| Sbjct 58833 CATATATTCAGACATATCAATACGAA 58858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 431008759936242