Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq386 96.9 3e-15 >seq386 Length=121086 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAA 6605 |||||| ||||| |||| ||||||||| |||| ||| || || | || || || Sbjct 3172 GCTCGAAATGGTTGGCATAGAGATGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCT 3231 Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665 || ||| ||| || || | |||| || ||||| || || || || ||||||| Sbjct 3232 GCAGACCCGTGACCTGCGCCACCATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACG 3291 Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCG 6725 |||| || | || || | || || || |||||||||||||| |||| || | | Sbjct 3292 GCACGCCGAGAAAGATATCGGCGGAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGG 3351 Query 6726 CGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 | |||||||| ||| | ||| |||||| || || |||||||| Sbjct 3352 CCACGTAGAACTGGAACAGGCAGTGGCAGGGCGGCAGCGCCAT 3394 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 |||||||| || || |||||| ||| | ||| |||||||| || | || |||| ||| Sbjct 3394 ATGGCGCTGCCGCCCTGCCACTGCCTGTTCCAGTTCTACGTGGCCGACGGAAAGCTTTCC 3335 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 ||||||||||| || || || | || || | || ||||||||||| || || Sbjct 3334 TGCCAGCTCTACCAGCGCTCCGCCGATATCTTTCTCGGCGTGCCGTTCAATATCGCATCC 3275 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTG 34756 || || ||||| || |||| | || || ||| ||| || || || || | || Sbjct 3274 TATGCCCTGCTGACCCTCATGGTGGCGCAGGTCACGGGTCTGCAGCCGGGTGATTTCGTT 3215 Query 34757 CATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799 || ||| |||| ||||||||| |||| ||||| |||||| Sbjct 3214 CACACGCTGGGCGATGCGCATCTCTATGCCAACCATTTCGAGC 3172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448218840101280