Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq982 167 6e-36 seq322 161 2e-34 seq540 141 2e-28 seq391 140 8e-28 seq5313 134 3e-26 seq6 131 4e-25 seq606 98.7 2e-15 seq6018 93.3 1e-13 seq54 91.5 4e-13 seq1755 89.7 1e-12 seq339 86.0 1e-11 seq6455 84.2 5e-11 >seq982 Length=41121 Score = 167 bits (184), Expect = 6e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| ||||| | |||||||| ||||||||||||| ||||| |||| ||||| | Sbjct 2604 AAGTCTGAGGACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCGGATAAAGTACG 2663 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||| || || || ||||| ||||||| |||||| || || || |||||||| Sbjct 2664 ACCATCTTCTAATTGTTTACCGGCGAAAATAAGTCTTTGTTGATCAGGTGGGATACCTTC 2723 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||| ||||| ||| ||| ||| |||||||| || ||| || || || || Sbjct 2724 TTTGTCTTGAATCTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCCAAGGT 2783 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||| || || || ||||| || |||| || | |||||| || Sbjct 2784 GATTGTTTTACCGGTCAAGGTCTTTACAAAAATTTGCATGTT 2825 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| ||||| | |||||||| ||||||||||||| |||||||| | | || | Sbjct 1920 AAGTCTGAGGACTAAATGGAGAGTAGATTCTTTTTGGATGTTGTAATCAGAGAGGGTACG 1979 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| | || || |||||||| ||||||| |||||| ||||| || |||||||| Sbjct 1980 ACCATCTTCCAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTC 2039 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||||||||| ||| || ||| ||||||||||| ||| || ||||| || Sbjct 2040 TTTGTCTTGGATCTTGGTCTTGACGTTTTCAATGGTGTCTGAACCTTCTACCTCTAAGGT 2099 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || || || ||||| || || | || | |||||| Sbjct 2100 GATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 2138 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||||| || ||||| ||||||| ||||| |||| ||||| | || Sbjct 2151 TCTAAGTACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAGTCGGATAAAGTACGACC 2210 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | || || || || |||||||||| |||||||||||| || |||||||| || Sbjct 2211 ATCTTCCAATTGTTTACCGGCAAAGATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTT 2270 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || |||||||||||| || ||| || || || ||||| Sbjct 2271 GTCTTGGATCTTGGTCTTGACGTTTTCGATGGTGTCAGAACCTTCGACTTCCAAGGTGAT 2330 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| || |||| || | |||||| Sbjct 2331 TGTTTTACCGGTCAAGGTCTTTACAAAGATTTGCAT 2366 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| ||||| || || | ||||| || ||||| ||||| | ||||| |||| ||||| Sbjct 2373 ACGGAGTCTAAGTACCAAATGGAGGGTTGATTCCTTTTGAATGTTGTAGTCGGATAAAGT 2432 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | || || |||||||| ||||||| |||||| ||||| || ||||| Sbjct 2433 ACGACCATCTTCCAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGTGGGATACC 2492 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| |||||||||||||| ||| ||| ||| |||||||| || ||| || || || Sbjct 2493 TTCTTTGTCTTGGATCTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCCAA 2552 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || ||||| || || | || | |||||| Sbjct 2553 GGTGATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 2594 >seq322 Length=112280 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| ||||| | |||||||| ||||||||||||| ||||| || | | || | Sbjct 12135 AAGTCTGAGGACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTACG 12076 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| | ||||| ||||| || ||||||| |||||| ||||| || |||||||| Sbjct 12075 ACCATCTTCCAATTGCTTACCAGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTC 12016 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||| ||||||||||| ||| ||| ||| |||||||| ||| ||| || ||||| || Sbjct 12015 CTTATCTTGGATCTTGGTCTTGACATTTTCAATGGTGTCAGAGCCTTCAACTTCTAAGGT 11956 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| || || | || | |||||| Sbjct 11955 AATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 11917 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| ||||| ||||| | |||||||| ||||||||||||| ||||| |||| ||||| Sbjct 11454 ACGGAGTCTGAGGACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCGGATAAAGT 11395 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | || || ||||| || ||||||| |||||| ||||| || ||||| Sbjct 11394 ACGACCATCTTCCAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACC 11335 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||||||||| || || || |||||||||||| || ||| || ||||| Sbjct 11334 TTCTTTGTCTTGGATTTTGGTTTTAACGTTTTCGATGGTGTCAGAACCTTCAACTTCTAA 11275 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || ||||| || || | || | |||||| Sbjct 11274 GGTAATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 11233 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || ||||||||||||| ||||| || | | ||| | |||||||||| || Sbjct 11207 TGAAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACCATCTTCTAATTGT 11148 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| || ||||||| |||||||||||| || |||||||| ||||||||||| || Sbjct 11147 TTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTCTTGGATTTTG 11088 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| ||| ||||| || || ||| || ||||| || || || || || ||| Sbjct 11087 GTCTTGACATTTTCAATGGTATCAGAACCTTCAACTTCTAAGGTAATAGTTTTACCGGTC 11028 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 || || |||| || | ||||||| Sbjct 11027 AAGGTCTTTACAAAGATTTGCATT 11004 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| || || | |||||||| ||||||||||||| ||||| || | | || | Sbjct 11679 AAGTCTGAGAACTAAATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGGGTACG 11620 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 || ||||||| || || ||||| || || |||| |||||||||||| || |||||||| Sbjct 11619 ACCGTCTTCTAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGTGGGATACCTTC 11560 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||||||||| ||| ||| || ||||| || || ||| || ||||| || Sbjct 11559 TTTGTCTTGGATCTTGGTCTTTACATTCTCAATGGTATCAGAACCTTCAACTTCTAAGGT 11500 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| || |||| || | |||||| Sbjct 11499 AATAGTTTTACCGGTCAAGGTCTTTACAAAGATTTGCAT 11461 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||||| || ||||||||||||| ||||| || | | ||| | || Sbjct 11904 TCTAAGTACCAAATGGAGTGTTGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 11845 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || ||||| || || |||| |||||| ||||| || |||||||| || Sbjct 11844 ATCTTCTAATTGTTTACCAGCAAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTCTTT 11785 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||| || ||| || ||| ||||| || || ||| || || || ||||| Sbjct 11784 GTCTTGGATTTTGGTCTTGACGTTTTCAATGGTATCAGAACCTTCTACTTCCAAGGTGAT 11725 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| || |||| || | |||||| Sbjct 11724 TGTTTTACCGGTCAAGGTCTTTACAAAGATTTGCAT 11689 >seq540 Length=89862 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | |||||||| ||||| ||||||| || ||||| | | || | Sbjct 84304 AGTCTGAGAACTAAATGGAGAGTTGATTCCTTTTGGATGTTATAATCAGAGAGGGTACGG 84245 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| | || || || || |||||||||| |||||||||||| || |||||||| Sbjct 84244 CCATCTTCCAATTGTTTACCGGCAAAGATAAGTCTTTGTTGGTCGGGTGGGATACCTTCT 84185 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || |||||||| || ||| ||| ||| |||||||| || ||| || ||||| ||| Sbjct 84184 TTATCTTGGATTTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCTAATGTG 84125 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| || || | || | |||||| Sbjct 84124 ATAGTTTTACCGGTCAAGGTCTTAACAAAGATTTGCAT 84087 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || || ||||| || ||||||||||||| |||||||| | | || | || Sbjct 84530 TCTAAGAACGAGATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAGAGGGTACGACC 84471 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | || || || || || ||||||| |||||| ||||| || |||||||| || Sbjct 84470 ATCTTCCAATTGTTTACCGGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTT 84411 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||| || ||| ||| ||| |||||||| || ||| || ||||| ||||| Sbjct 84410 ATCTTGGATTTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCTAATGTGAT 84351 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| ||||| | || | |||||| Sbjct 84350 GGTTTTACCGGTCAAGGTTTTAACAAAAATTTGCAT 84315 Score = 140 bits (154), Expect = 8e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||||| || ||||| ||||||| || ||||| | | || | || Sbjct 83846 TCTAAGTACCAAATGGAGGGTTGATTCCTTTTGGATGTTATAATCAGAGAGGGTACGACC 83787 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | || || || || ||||| |||| |||||||||||| || |||||||| || Sbjct 83786 ATCTTCCAATTGTTTACCGGCAAAGATTAGTCTTTGTTGGTCGGGTGGGATACCTTCTTT 83727 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||| || ||| ||| ||| |||||||| || ||| || ||||| ||||| Sbjct 83726 ATCTTGGATTTTGGTCTTGACATTTTCAATGGTGTCAGAACCTTCAACTTCTAATGTGAT 83667 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717 || || || || ||||| |||| || | |||||||||| Sbjct 83666 AGTTTTTCCGGTTAAAGTCTTTACAAAAATTTGCATTTTA 83627 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| ||||| | || || || ||||||||||||| || ||||| | | || | Sbjct 84077 AAGTCTGAGGACTAAATGAAGGGTTGATTCTTTTTGGATGTTATAATCAGAGAGGGTACG 84018 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| | || || || || || ||||||| |||||| ||||| || |||||||| Sbjct 84017 ACCATCTTCCAATTGTTTACCGGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTC 83958 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 || ||||||||||| ||| || ||| |||||||| ||| || || ||||| || Sbjct 83957 TTTATCTTGGATCTTGGTCTTGACGTTTTCAATGGTGTCAGAGCCCTCAACTTCTAATGT 83898 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || || || ||||| ||||| | || | |||||| Sbjct 83897 GATTGTTTTACCGGTCAAGGTTTTAACAAAAATTTGCAT 83859 >seq391 Length=66319 Score = 140 bits (154), Expect = 8e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| ||||| || || | ||||| || ||||| ||||||| |||||||| ||||| Sbjct 37215 ACGGAGTCTGAGAACTAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCTTGTAAAGT 37274 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||||| || || ||||| |||||||||| |||||| ||||| || ||||| Sbjct 37275 ACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGTCTTTGTTGATCGGGGGGGATACC 37334 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||||||||| || ||| || ||||||||||||||| || || || | Sbjct 37335 TTCTTTGTCTTGGATTTTAGCCTTGACGTTTTCGATGGTGTCTGATCCCTCTACTTCGAG 37394 Query 225672 CGTGATCGTCTTGCC 225686 || |||||||| || Sbjct 37395 AGTAATCGTCTTACC 37409 >seq5313 Length=453 Score = 134 bits (148), Expect = 3e-26 Identities = 114/139 (82%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794 ||||||||||| || | |||||||| |||||||| |||| ||||||||||| ||| Sbjct 285 TTGGTAAGATTTTTCGTGTTATATCGAATTAAACTACATGCTCCACCGCTTGCGCAAATC 344 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-ACG 7853 ||||||| || ||||||||||||| |||||| ||||| |||||||| ||| ||||| ||| Sbjct 345 TCCGTCAATTCCTTTGAGTTTTAATCTTGCGATCGTACTACTCAGGCGGAGTATTTAACG 404 Query 7854 CGTTAGCTTAATTAATATA 7872 |||| || || || |||| Sbjct 405 TGTTAACTAAAATATTATA 423 >seq6 Length=53452 Score = 131 bits (144), Expect = 4e-25 Identities = 104/125 (83%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 7727 TTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTA 7786 ||| | | ||||||||||||| | |||||||| ||||||||||||||||||||||||| Sbjct 52988 TTCAATGATTGGTAAGATTCTGCGTGTTATATCGAATTAAACCACATACTCCACCGCTTG 52929 Query 7787 TACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT 7846 | ||| ||||||| || ||||||||||||| |||||| |||| |||||||| ||| | Sbjct 52928 TGCAAATCTCCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTACTACTCAGGCGGAGT 52869 Query 7847 ATTTA 7851 |||| Sbjct 52868 GTTTA 52864 Score = 122 bits (134), Expect = 2e-22 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||||||||||||| ||||| || || | |||||| ||||||||||| || ||||| ||| Sbjct 51415 AATATTTGACCATCGGTAATTGAAATTATATTTGTTGGGATATAAGCTGATACATCTCCT 51356 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATTT 4587 ||||||||||| |||| || || ||||||| |||||||| ||| | |||| |||| Sbjct 51355 GCTTGTGTTTCTACAATTGGAAATGCTGTTAATGATCCACATCCATATTTTTCATTT 51299 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 5031 GCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATGGTAAACATGCTTTA 5090 || ||||| |||| ||| |||||||||||||||||||||| | || ||||||| ||| Sbjct 51099 GCACCATATTCAGGATGTTCTATAGGAGAATATTTTAGAGATCAAGGAGAACATGCATTA 51158 Query 5091 ATCATCTACGATGATTTAAGTAAACA 5116 || | || ||||||||||||||||| Sbjct 51159 ATAGTATATGATGATTTAAGTAAACA 51184 >seq606 Length=289815 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/113 (81%), Gaps = 3/113 (3%) Strand=Plus/Minus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||| Sbjct 633 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 575 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878 |||||| ||||||| ||||||||||| |||| ||||| || ||| ||||| Sbjct 574 CAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGA 522 >seq6018 Length=434 Score = 93.3 bits (102), Expect = 1e-13 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 371013 TAATACAGGCTTGCTTAAAAAATAAGGTCGACATTTCTAGATTTTGTTTTCATGAAAAAT 371072 || |||| || || |||||| || || || ||| | |||||||||| ||||||||||| Sbjct 10 TATTACAAGCATGTTTAAAATATGGTGTTGAAATTCCAAGATTTTGTTATCATGAAAAAT 69 Query 371073 TATCTATTGCAGGTAATTGTCGTATGTGTTTGGT 371106 || | |||||||| ||||||||||||||||| || Sbjct 70 TAACAATTGCAGGGAATTGTCGTATGTGTTTAGT 103 >seq54 Length=99412 Score = 91.5 bits (100), Expect = 4e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796 |||||| ||| | ||| |||| ||||||||||||| ||||||||||| | | | | Sbjct 13468 GGTAAGGTTCCTCGCGGACTATCGAATTAAACCACATGCTCCACCGCTTGTGCGGACCCC 13527 Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA 7851 ||||| || |||||||||| | ||||||| |||| | | |||||||| || ||| Sbjct 13528 CGTCAATTCCTTTGAGTTTCACTCTTGCGGGCGTACTCCCCAGGTGGATTACTTA 13582 >seq1755 Length=4651 Score = 89.7 bits (98), Expect = 1e-12 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683 |||| ||||| || ||||||||||||||||| ||||||||||| ||| || |||| | Sbjct 1709 GGTGGCACAGACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGGCTCTGCGAAGTCGC 1650 Query 372684 AAAACGATGTATAGGGTCTGAC 372705 || |||| |||||||||||||| Sbjct 1649 AAGACGACGTATAGGGTCTGAC 1628 >seq339 Length=35222 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 225607 ATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACG 225666 |||||||| ||||||||||| || ||| ||| |||||||||||| || ||| || Sbjct 20951 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCGATGGTGTCAGAACCTTCTACT 20892 Query 225667 TCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT--TTTATGGTTAC 225724 ||||| ||||| || || || || || ||||| | ||| | |||||| ||||| |||| Sbjct 20891 TCTAAGGTGATGGTTTTTCCGGTTAAGGTTTTAACGAAGATTTGCATGCTTTATTATTAC 20832 Query 225725 T 225725 | Sbjct 20831 T 20831 >seq6455 Length=374 Score = 84.2 bits (92), Expect = 5e-11 Identities = 67/80 (84%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 372630 ACAGAATAGAGGG--TAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAA 372687 |||||| |||||| ||||||||||||| ||||||||||||||| || || | | || | Sbjct 74 ACAGAAAAGAGGGGGTAGCGACTGTTTAACAAAAACACAGGACTCTGCAAAATGGCAACA 133 Query 372688 CGATGTATAGGGTCTGACAC 372707 |||||||||||||||| || Sbjct 134 TGATGTATAGGGTCTGATAC 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192412418675156