Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq1412 87.8 2e-12 seq520 86.0 7e-12 >seq1412 Length=10105 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 66401 AATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTAT 66460 |||||| ||||| ||||| ||||||||| |||| | ||||||||||| | |||||||| Sbjct 1825 AATGGCGCACCCGGCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTAT 1884 Query 66461 CCAGCTGAGCTAAGAGTGCATTA 66483 |||||||||||| | | || ||| Sbjct 1885 CCAGCTGAGCTACGGGCGCCTTA 1907 >seq520 Length=453493 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 66402 ATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATC 66461 ||||| ||||| |||||||||||||||||||||| | ||| | ||| | |||||||| Sbjct 386740 ATGGCGCACCCGACAGGATTCGAACCTGTGACCTCTGCCTTCGGAGGGCAGCGCTCTATC 386681 Query 66462 CAGCTGAGCTAAGAGTGCAT 66481 ||||||||||| | |||||| Sbjct 386680 CAGCTGAGCTACGGGTGCAT 386661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522064463455440