Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq386 100 4e-16 >seq386 Length=121086 Score = 100 bits (110), Expect = 4e-16 Identities = 175/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 99522 GGCGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTG 99581 ||||||||||| || || || || || | || || | || ||||| || || || Sbjct 3760 GGCGACCGTACCGGGACAGGCACACGTTCCGTTTTCGGCTACCAGATGCGATTCGATCTG 3701 Query 99582 GCTGAAGGTTTTCCTCTGGTCACTACTAAGCG-CTGTCACCTCCGTTCTATTATTCATGA 99640 | | ||||||||| | || || ||| ||| || ||| || || || || || Sbjct 3700 TCGGCGGGTTTTCCTGCCCTGACGACCAAGAAACTG-CATCTCAAATCCATCATCCACGA 3642 Query 99641 ACTCCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTCAC 99700 || || |||||||||||||| || || || | | || || || || |||||||| || Sbjct 3641 GCTGCTGTGGTTCCTGAAAGGCGAAACGAACATCGCCTATCTCAAGGAAAACGGCGTGAC 3582 Query 99701 TATCTGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTG 99760 |||||| |||| |||| |||||||||| || | || ||||| || || | ||||| Sbjct 3581 GATCTGGGATGAATGGGCCGACGAGAACGGCGATCTCGGGCCGGTCTATGGCTATCAGTG 3522 Query 99761 GCGGTCTTGGCC 99772 ||| || ||||| Sbjct 3521 GCGCTCCTGGCC 3510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734203846807440