Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq3 80.6 9e-11 >seq3 Length=206501 Score = 80.6 bits (88), Expect = 9e-11 Identities = 95/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 40161 TCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCG 40220 ||||| || ||||| || | ||||||||||| || || || ||||| | || ||||| Sbjct 10591 TCATCAAAATCGATATCGATATCGGGCATGGATACCCGTTCAGGGTTTAAAAAACGCTCA 10532 Query 40221 AAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGC 40280 |||| || || |||| ||||| | ||||||||||| | || ||||| || | | Sbjct 10531 AAGAAAAGATTGTAATGGATCGGGTCAATATCTGTGATGCCAATACAATAGGCTACTACC 10472 Query 40281 GAACCGGCA 40289 ||||||||| Sbjct 10471 GAACCGGCA 10463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160126016401872