Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_031098.1 Length=40749 Score E Sequences producing significant alignments: (Bits) Value seq3418 91.5 4e-14 >seq3418 Length=564 Score = 91.5 bits (100), Expect = 4e-14 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 33312 GTATTCGCTCTATCTCAGCTTAGCCGCAACTTAGAGAACAGACCTAACAAACGTCCAGTT 33371 ||| | || || || ||||||| ||| | |||||| | || || |||||||| || Sbjct 286 GTAATTGCCCTGTCACAGCTTAACCGATCGCTGGAGAACCGTCCGAATAAACGTCCGGTG 345 Query 33372 AATGCTGATCTCCGCGAATCTGGCCAATTGGAGCAGGATGCGGACGTGATTCTATTCATT 33431 | | || | || ||||| || | ||||||||||| ||| |||| | || ||| Sbjct 346 ATGTCCGACTTGCGTGAATCCGGTGCGATCGAGCAGGATGCCGACTTGATCATGTTTATT 405 Query 33432 TACCGCGACGAAGTTTACGACAAGAACTCAAAAGATGCAGGAACTGCTGAAATCATCATC 33491 ||||| || || ||||| ||||| | || ||||| || || ||||| ||||| || ||| Sbjct 406 TACCGGGATGAGGTTTATAACAAGGAATCTAAAGAAGCTGGCACTGCCGAAATTATTATC 465 Query 33492 GGAAAGTGCCGTGATGGAGAGGTGGGAACTGTACGTCT 33529 || || ||| |||| | || || |||||||| Sbjct 466 GGCAAACAGCGTAATGGTCCAATTGGTACCGTACGTCT 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130263173482068