Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq322 87.8 1e-12 >seq322 Length=112280 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/240 (68%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 44099 TTTTATTTCATTCCC-CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGAT 44157 |||||||| ||| || ||||| ||||| | || | || || || || |||||||| Sbjct 12156 TTTTATTTAATTTCCACCTCTAAGTCTGAGGACTAAATGGAGAGTTGATTCTTTTTGGAT 12097 Query 44158 GTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTG 44217 |||||| || | ||| || | || |||| ||||| || ||||| || | | || Sbjct 12096 GTTGTAGTCAGAGAGGGTACGACCATCTTCCAATTGCTTACCAGCAAAAATAAGTCTTTG 12037 Query 44218 CTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTC 44277 ||||| | || | ||||||||| || ||||| ||| | || | |||||||| Sbjct 12036 TTGATCGGGTGGGATACCTTCCTTATCTTGGATCTTGGTCTTGACATTTTCAATGGTGTC 11977 Query 44278 GGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | ||| || || | ||||| || || || || | |||||| || || |||||||| Sbjct 11976 AGAGCCTTCAACTTCTAAGGTAATAGTTTTACCGGTCAAGGTCTTGACAAAAATTTGCAT 11917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359956292484558