Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq379 102 1e-16 >seq379 Length=57893 Score = 102 bits (112), Expect = 1e-16 Identities = 197/287 (69%), Gaps = 8/287 (3%) Strand=Plus/Plus Query 155764 ACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGTTTCAACGGC-TATTTTATTTAAGTCT 155822 ||||||| | |||||| || || ||||||||||||||| || |||| | ||||||| | Sbjct 33854 ACCCTTCAATTTCAGCACCACTATAATTTTTAGTTTCATGAGCATATTGT-TTTAAGTTT 33912 Query 155823 ACGTCGGAAGCTAATATGTTGTGAGATTT---CATTTTAGCAACGTGCACCTTTAAAATT 155879 || || | || | || || | ||| ||||||||| || | || || ||| Sbjct 33913 ACATCTGGGGCGAGGATATTATT---TTTGGACATTTTAGCGGTATGTATTTTGAAGATT 33969 Query 155880 TGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGT 155939 || ||| || | ||||| ||||| ||||||| | | |||||| || || || Sbjct 33970 TGTTCACGACCTTCTTCATTAGGTAAGGAGATTTCTACATGTACTTCCAAACGACCTGGA 34029 Query 155940 CTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTG 155999 | | ||| || || ||||| | || ||||||||||||||| |||| | || || Sbjct 34030 CGAAGTAAAGCCTCATCAATCATATCCTTTCTGTTGGTCATACCAATGACGAGGATATTA 34089 Query 156000 TTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || |||| || ||||| || || | | ||| | ||||||||| || Sbjct 34090 TTCAAAGCCTCGACACCATCAATCATGGCCAAGAGTTGATTGACAAC 34136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667010376967440