Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq213 134 1e-26 >seq213 Length=53756 Score = 134 bits (148), Expect = 1e-26 Identities = 371/561 (66%), Gaps = 21/561 (4%) Strand=Plus/Minus Query 15934 TTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGT 15993 |||||| ||||| ||||||| | | || || ||||||| ||||||| ||||| | Sbjct 48625 TTCGAAAAAGTTTGTTTTTCTTTGGAGGGAAATCATTTCCATCCAATCAAAAGGATTTGA 48566 Query 15994 AGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAAT---CTATCTGCTACAAATTC 16050 ||| | | ||||| || |||| | | || || | ||| || |||||| Sbjct 48565 AGCATTATAAATCTTTTTATAACCCAAT---GAGACCAAAAGACGATCAGCACAAAATTC 48509 Query 16051 TATATATTGACACATTAAGTCGCAATTAATTCCTAT-AAGTCGTACCGGAAGAGCTTTTG 16109 || |||||| ||||| | | ||| || || || || || ||| || | || | Sbjct 48508 AATGTATTGAGACATTGAACGACTATTCATACCAATTAAATC-TACTGGTAAAGAGTCAC 48450 Query 16110 TTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCG----GTGGCTCGTGTT 16165 | ||||| || ||| ||||| || ||| |||| || | | | || | || Sbjct 48449 AAATAAATTCTTTTTCGCAAACAACGGCATCTCTAATAATGGCTTCAAGAGTCTTGGATT 48390 Query 16166 TCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCT 16225 || || ||| || ||||| |||| ||||| || || | |||||| || ||| Sbjct 48389 CGAGTTTGTTTATTAATTTGGTGTATAAA----AGACATGCAAAATTGCAATGAAGACCT 48334 Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || || | ||| | |||||| ||||| ||||| ||||||||| |||| |||||| Sbjct 48333 TCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCTCTCTTCTTT 48274 Query 16286 AACCAGAATAT-CGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 |||||||| || | ||| ||| | ||| || |||||||| || | ||||| || Sbjct 48273 AACCAGAAAATACTACAAAAACTACCACTGAAA-AAGATACCCTCTACTGCGGCAAATGC 48215 Query 16345 GATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGC 16404 | || ||||| || | || ||| ||||| ||||||||| | |||| || || Sbjct 48214 AACCAAACGTTCTGCAAA---AGAATCACTATTATTAATCCATTTTAATGCCCAATCAGC 48158 Query 16405 TTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAAT 16464 ||| | ||| ||||| || || ||||| || ||||| | ||| ||||| || | | Sbjct 48157 TTTCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTACTTTTTTGCTCATT 48098 Query 16465 ATCGATTATATACGTATCAAT 16485 ||| | ||||| |||||||| Sbjct 48097 ATCTTTAATATATGTATCAAT 48077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511409292248680