Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq230 235 7e-57 seq213 154 2e-32 >seq230 Length=51241 Score = 235 bits (260), Expect = 7e-57 Identities = 1191/1885 (63%), Gaps = 56/1885 (3%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| | | | | || || ||||| ||||||||||| || ||||| ||| Sbjct 27987 GTGAATTGAATAGCATCAGCAGCTGGACGAGTACGGAGATAGTACATACCAGTTTTGAGA 28046 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || |||| ||| |||||||| ||| ||||| | | || | || || || ||| Sbjct 28047 CCTTTTTTCCAAGAGTAGAAATGCATTGATGTAAGTTTAGCAAAAGTTGGTTCAGCAATA 28106 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 | ||| | | |||||||||||| || || || || | || |||||||| | || Sbjct 28107 AAAACATTGAAACTTTGACTTTGATCAATAAAAGCACCACGATCAGCAGCCATATCAATT 28166 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 | || ||||| ||||||||||| ||||| |||| | |||| ||| ||||||| | Sbjct 28167 AATGTTCTTTGTCTAATTTCCCAAACTGTTTTGTAAAGTTCTTTAAGATCATCTGGAATG 28226 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA--TCTCATCAT 53102 || || | ||||| || |||| | | | || |||||| | ||| | | Sbjct 28227 GATGGGATACTTTGAATTGAACCACGGTTGAGAACGATTTGATTCTTTAATTCTGGTGA- 28285 Query 53103 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 53162 ||| | | | ||| | | | || || || || ||| || | |||||| | Sbjct 28286 -CCAAATTCCTAACTCCATGAGATCTTCGAGAAGTTGTTTATTGACAATAGTAAATTCAC 28344 Query 53163 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 53222 ||| || || | ||| ||||||| ||||||||||| ||||| | | || || || | Sbjct 28345 CAGCTAAAACACGACGACTGTAAATGTTACTGGTATATGGTTCAAAGCATTCGTTGTTAC 28404 Query 53223 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 53282 | |||||||| | |||||||||||| ||||| ||||| | || | || | ||||| Sbjct 28405 CTAAAATTTGTGAAGTTGATGCAGTTGGCATTGGTGCTATTAAAAGTGAGTTACGAAGAC 28464 Query 53283 --CGTATGTT-CTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 53339 | | | || ||||||||||| ||| ||| |||||| ||| | ||| || Sbjct 28465 CACCTTTATTAACAATTTTATCTTTGAGATCAGTCCAGTTCCAACGATTTGTTGGTGTAA 28524 Query 53340 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 53399 | ||| |||||||| | ||||| || ||| | |||| || | Sbjct 28525 CATTCCAGAAATCGTATTGGAGAATACCTTGGCTGGCTGGTGAACCTTTAAATGTTTCAT 28584 Query 53400 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAA-TGCACCGTAATAAATGGTT 53458 |||| ||||| | || || || | || ||| ||| | ||||||| ||| Sbjct 28585 ATGGACCTTCAATAAGAGATAACTCGTGTGATG-CTGTAAGGGCAGCAAAATAAATAGTT 28643 Query 53459 TCGAAGATCTTCTTATTTAGATCTTG-TGCTTCCAGGCTATCAAATGG-ATAATTTAAG- 53515 || || | | |||| || ||| || | | ||||||||| ||| ||| Sbjct 28644 TCTGCAATTTCAATGTTTA-ATTTTGCGGCAGCGGTACCATCAAATGGCATA--CGAAGT 28700 Query 53516 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 53575 |||| || | || || | ||||||| ||||||||| || || | |||||| |||| Sbjct 28701 TGAATGAAAACATCAGCAAGACCTTGAATACCAATACCAATTGGACGATGTCTTAAATTA 28760 Query 53576 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635 ||| ||| |||||| ||| ||||| || ||| ||| |||||||| || || || || Sbjct 28761 GAGGTTTTGGCTTCTTGAACTGGATAGTAGTTACGATCAATAATTTTGTTAAGATTCTTG 28820 Query 53636 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGT--------------- 53680 || | ||| | || | ||||| || |||||||| | Sbjct 28821 GTAACAATTTTAGTGATTTCATAAAGTTTTTGATGATCAAATTCTTTTTCTTTTGGATTG 28880 Query 53681 ------CCATCTAT--TACAAA--CATGTT--CAATGCAATAGATGCCAGATTACAAACG 53728 || ||| | ||| || || || || ||||| ||||| |||||||| || Sbjct 28881 GTTGAACCTTCTTTTCTACGAATGAATTTTGGTAAGGCAATGGATGCGAGATTACATACA 28940 Query 53729 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATG 53788 || | ||||| | | ||||| || || || || ||||||||||| | | || Sbjct 28941 GCAATCTCATCTGGGGATGTGTATTGAATAATTTCGGTACAAAGATTACTGCTGCTAATA 29000 Query 53789 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGC 53848 || || | ||| | |||||| || ||||| | ||| ||||| ||||| ||||| Sbjct 29001 GTACCAAGATTCTTTTGATTGGATTTAGAATTACAAGAATCTTTATAGAGAATAAATGGT 29060 Query 53849 GTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA 53908 ||||||||||||| || || || || || || ||| | | |||| || |||| | Sbjct 29061 GTACCAGTTTCAACTTGAGACTCCATGATTGCAAACCAAAGTTCTTGAGCTTTAATTACA 29120 Query 53909 -GATTTGTA---TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCC 53964 | | | | || | | | |||| ||| | | | || ||||| | ||| | Sbjct 29121 CGTCTAGCAAGGCCTGGTGTAT-TTTC--ATATTTGAGATAA-AGTTCACGATGTTCTTC 29176 Query 53965 CCA---AACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 54021 | | | ||| | | || ||| | ||||| | | ||||| ||||||| Sbjct 29177 TGAGTGAGTTTCGTCAAGACGTGGGGCTTCGTTAGGACAAAAGAGTGACCAATCTCCGTT 29236 Query 54022 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 54081 | | |||| || ||| || ||||| | ||||||||| ||| |||||||||| Sbjct 29237 TTGTTCTACTCTTTCCATGAAAAGATCGCTGACCCAAAGAGCGTAAAAGAGATCTCTGGC 29296 Query 54082 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 54141 ||| ||| || || || ||||||||| || || | || | | |||||| || || Sbjct 29297 TCTCATTTCTTCCTTACCATGATTCTTTTTGAGTTCAATAAATTCAAAAATATCTGAGTG 29356 Query 54142 CCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 54201 ||| ||||| | |||| | | | || | ||| || || ||||||| || Sbjct 29357 CCATGGTTCGAGATATACTGCAAAGGCACCTTTTCTTTTACCACCACCTTGATCTACATA 29416 Query 54202 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 54261 | ||| || | ||| |||| | | |||||| | | |||||| | |||||||| Sbjct 29417 ACGAGCAGTATCATTGAAAACACGGAGCATTGGTACCAAACCATTACTGGTGCCATTGGT 29476 Query 54262 CCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGC 54321 || ||||| ||| | ||||||||| ||| | | |||||| || ||||| Sbjct 29477 ACCACGAATATAACTTTGAGCGGCACGAATCTTATGGCAAGCAATACCTATACCACCTGC 29536 Query 54322 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 54381 ||| || ||||| || ||| |||| | |||||||| || || || || ||| || Sbjct 29537 AGATTTTGAAATTAAAGCACATTGTTTGAGGGTATCATAAATACCATCGATTGAATCCTC 29596 Query 54382 CATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 54441 |||| | || || ||| || |||||||| | || || ||||| || | Sbjct 29597 TTTCATTTGAACTAAAAAGCATGAGGACATTTGTGGGTATGGTGTACCAGCATTGAAAAG 29656 Query 54442 GGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGA 54501 || || | || || ||||| ||||| | | | | ||| || || || Sbjct 29657 AGTTGGTGTGGCATGTGTAAAGAGTTTTTGACTTAATTTCTCGTAGGTAAGAATTGCATT 29716 Query 54502 GTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 54561 ||| ||||| |||||| || | | |||||||||| |||||| || || | ||| Sbjct 29717 GTCGATATCGTTACCATGAATACCGATAGAAACACGCATTAGCATGTGTTGTGGACGTTC 29776 Query 54562 AACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 54621 |||||| | ||||| || | | || || ||| || ||||| |||||||| | Sbjct 29777 AACGATGCTATTGTTGATACGATGAAGATATGAACGTTCTAATGTTTTGAAACCAAAGAA 29836 Query 54622 GTTGTATGAAAAGTCTCGTTCGTAA 54646 | ||| || || |||| |||| Sbjct 29837 ATCGTAATCGAAATCACGTTGGTAA 29861 >seq213 Length=53756 Score = 154 bits (170), Expect = 2e-32 Identities = 388/574 (68%), Gaps = 28/574 (5%) Strand=Plus/Minus Query 23867 TTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGT 23926 ||||||||| || ||||| | || | || || ||||||| |||| | ||||| | Sbjct 48625 TTCGAAAAAGTTTGTTTTTCTTTGGAGGGAAATCATTTCCATCCAATCAAAAGGATTTGA 48566 Query 23927 AACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAAT---CTATCTGCGACAAACTC 23983 | ||||||| || ||||| | |||||| || | ||| | ||| || ||||| | Sbjct 48565 AGCATTATAAATCTTTTTATAACCCAAT---GAGACCAAAAGACGATCAGC-ACAAAATT 48510 Query 23984 CATATATGTTTTCAT-CATTTCACAA---TTCATTCCTATAAGTTTAACTGG--AAGAGC 24037 || |||| || | |||| || | ||||| || || | | ||||| ||||| Sbjct 48509 CA---ATGTATTGAGACATTGAACGACTATTCATACCAATTAAATCTACTGGTAAAGAGT 48453 Query 24038 CACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTC 24097 |||| || |||||||| ||| | || || ||| | ||||| | ||| | || Sbjct 48452 CACA--AATAAATTCTTTTTCGCAAACAACGGCATCTCTAATAATGG--CTTCAAGAGTC 48397 Query 24098 TTC-ACTCG-GTGGATACAATAAAT--GTTTAAACATCAAACATGCGAAATCGCAGTGTA 24153 || | ||| || | | ||| | || || | | | |||||| |||| ||| || | Sbjct 48396 TTGGATTCGAGTTTGTTTATTAATTTGGTGTATAAA--AGACATGCAAAATTGCAATGAA 48339 Query 24154 GACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCT 24213 |||| || || | | ||||||||||| ||||| || | || ||||||| || | || Sbjct 48338 GACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCTCTCT 48279 Query 24214 TTTTAAGCCAAAATATGG-ACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCA 24272 | || | ||| || || || ||| | ||| || || || || |||||||| ||| Sbjct 48278 TCTTTAACCAGAAAATACTACAAAAACTA-CCACTGAAAAAGATACCCTCTACTGCGGCA 48220 Query 24273 AAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCG 24332 || |||| | | |||| || || | || | || ||||| ||| |||||||| Sbjct 48219 AATGCAACCAAACGTTCTGCAAAAGAATCACTATTATTAATCCATTTTAATGCCCAATCA 48160 Query 24333 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 24392 || |||||||| | ||| || || || ||||| || ||||| || | |||||| | | Sbjct 48159 GCTTTCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTACTTTTTTGCTCA 48100 Query 24393 CTATCTTTAACATATGTATCAATCAAAAGACTAT 24426 ||||||||| |||||||||||| |||||||||| Sbjct 48099 TTATCTTTAATATATGTATCAATTAAAAGACTAT 48066 Score = 136 bits (150), Expect = 5e-27 Identities = 224/320 (70%), Gaps = 5/320 (2%) Strand=Plus/Minus Query 24430 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 24489 |||| || ||||| |||||||| || ||||| || || || ||||||||||| || | || Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 24490 TCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 24549 | || || || | |||| || | |||||| || || || || ||| || | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 24550 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTTAGTT---TATTC 24605 |||| || || || |||| ||||||| |||| | | || | |||| || || Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGT-TGAGTTTACTACTC 47814 Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665 ||||| |||| |||| | | ||| | |||||| |||||||||| ||| ||||| Sbjct 47813 CAATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCT 47754 Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGA 24725 | |||||||||| ||||||| || | |||| |||||||| | |||||||||| | | Sbjct 47753 TGTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATCTTTA 47694 Query 24726 TTTTTTGCAAGGATTGGTTC 24745 |||| | | |||||||| Sbjct 47693 TTTTCTTTTAAAATTGGTTC 47674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593715670205520