Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq246 109 5e-19 seq242 104 2e-17 seq86 98.7 8e-16 seq7 91.5 1e-13 >seq246 Length=49296 Score = 109 bits (120), Expect = 5e-19 Identities = 169/240 (70%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 25023 AATAGTGTAAAA-ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGA 25081 |||| | ||||| |||||||| || | ||||| | || ||||||||||| ||| || Sbjct 11280 AATAATTTAAAACATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACCATCACCTTAGA 11221 Query 25082 AACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGT 25141 ||| | || || | | || | || ||||| |||||||||||| | Sbjct 11220 GGTCGAAGGTTCTGATACTATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTAT 11161 Query 25142 GCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTAT 25201 || |||||||||||||||||||||||| || |||||||| |||||| ||| | Sbjct 11160 CCCACCAGATCAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCT 11101 Query 25202 GGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||| |||||||||||||| |||||||| || || | || ||| || | || || || Sbjct 11100 TTCCGACTACAATATTCAAAAAGAATCTACCCTCCATTTAGTTTTAAGACTTCGTGGTGG 11041 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | ||||| || || || ||||||||||| ||| ||| | Sbjct 10811 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAAACCATTACTTTAGAAGTCGAAGGTTCT 10752 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | || ||||| |||||||||||| | || ||||||| Sbjct 10751 GATACCATCGAAAATGTAAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 10692 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || || ||||| || |||||||| |||||| ||| | |||| |||||| Sbjct 10691 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTACAAT 10632 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| |||||||| | || ||| ||||| |||| || Sbjct 10631 ATTCAAAAAGAATCAACTCTTCATTTAGTATTAAGATTAAGAGGTGG 10585 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | || |||||||||| | || || ||||| || |||||||| ||| Sbjct 10946 GACAAAGAAGGTATCCCACCAGATCAACAACGTCTCATTTTTGCCGGTAAACAATTAGAA 10887 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| ||| | |||| || ||||||||||| ||||| |||||||| | || ||| Sbjct 10886 GATGGTCGTACTCTTTCCGACTATAATATTCAAAAAGAATCAACTCTTCATTTAGTTTTA 10827 Query 25248 CGATTACGAGGAGG 25261 || | || || || Sbjct 10826 AGACTTCGTGGTGG 10813 >seq242 Length=49570 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | ||||| || || || ||||||||||| ||| ||| | || Sbjct 3833 ATGCAAATTTTCGTTAAAACTTTAACCGGTAAAACCATTACTTTAGAAGTTGAAGGCTCA 3774 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | || |||||| || ||||||||| | || ||||||| Sbjct 3773 GATACTATTGAAAACGTTAAAACTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAA 3714 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||||||||| ||||| || |||||||| |||||| ||| | | || ||||| Sbjct 3713 CAAAGACTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 3654 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| ||||| || | || | ||||| |||| || Sbjct 3653 ATTCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 3607 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | ||||| | || || |||||||||||| |||| ||| | || Sbjct 4517 ATGCAAATTTTTGTTAAAACCCTTACTGGTAAAACCATTACCCTCGAAGTCGAAGGCTCA 4458 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | |||| ||||| |||||||||||| | || ||||||| Sbjct 4457 GATACAATTGAAAACGTCAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 4398 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||||||||| ||||| || |||||||| |||||| ||| | | || || ||| Sbjct 4397 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAAT 4338 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| ||||| ||||| || | || | ||||| |||| || Sbjct 4337 ATCCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 4291 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| ||||||| || || || ||||| ||||| ||| ||| | || Sbjct 4061 ATGCAAATTTTCGTCAAAACTTTAACCGGTAAAACTATTACTTTAGAAGTTGAAGGCTCA 4002 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| || ||| |||||||||||| | || ||||||| Sbjct 4001 GATACAATTGAAAATGTAAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 3942 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || ||||| || |||||||| |||||| ||| | | || || ||| Sbjct 3941 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTATAAT 3882 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| ||||| ||||| || | || ||| || | || || || Sbjct 3881 ATCCAAAAAGAATCAACTCTCCATTTAGTATTAAGACTTCGTGGTGG 3835 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | ||||| | || ||||| |||||||| ||| ||| | | Sbjct 4745 ATGCAAATTTTTGTTAAAACTCTTACTGGCAAGACCATTACTTTAGAAGTAGAAGGCTCT 4686 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| ||||| ||||||||||| | || ||||||| Sbjct 4685 GATACCATTGAAAATGTAAAGACCAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 4626 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||||||||| ||||| || |||||||| |||||| ||| | | || ||||| Sbjct 4625 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAAC 4566 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| ||||| ||||| || | || ||| || | || || || Sbjct 4565 ATCCAAAAAGAATCAACTCTCCATTTAGTATTAAGACTCCGTGGTGG 4519 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | ||||| | || || ||||| || ||| ||| ||| | || Sbjct 4289 ATGCAAATTTTTGTTAAAACTCTTACTGGTAAAACTATCACCTTAGAAGTTGAAGGCTCA 4230 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | || ||||| |||||||||||| | || ||||||| Sbjct 4229 GATACTATTGAAAATGTTAAAACTAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 4170 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || || ||||| || |||||||| |||||| ||| | | |||||||| Sbjct 4169 CAACGTCTCATTTTTGCAGGAAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 4110 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| ||||| || | || | ||||| |||| || Sbjct 4109 ATTCAAAAAGAATCAACTCTCCATTTAGTCCTTAGATTAAGAGGTGG 4063 >seq86 Length=87693 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| ||||||| | || || |||||||| ||| |||| ||| | || Sbjct 63068 ATGCAAATTTTCGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63127 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | |||| || ||| |||||||||||| | || ||||||| Sbjct 63128 GATACCATCGAAAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 63187 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || || ||||| || |||||||| |||||| ||| | | || ||||| Sbjct 63188 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAAC 63247 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| ||||| || | || ||| || | || || || Sbjct 63248 ATTCAAAAAGAATCAACTCTCCATTTAGTTTTAAGACTCCGTGGTGG 63294 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || ||||||| | || || |||||||| ||| |||| ||| || Sbjct 63296 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 63355 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | || ||||| || ||||||||| | || ||| ||| Sbjct 63356 GATACCATTGAAAATGTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 63415 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||| || || || |||||||| |||||| ||| | | ||||||||| Sbjct 63416 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 63475 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| ||||| || | || | ||||| |||| || Sbjct 63476 ATTCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 63522 >seq7 Length=199231 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 |||||||||||| | || |||||||||| | ||||||||||| ||||||||||| ||| Sbjct 43635 GATAAAGAAGGTATCCCACCAGATCAACAACGTCTTATCTTTGCAGGCAAACAATTAGAA 43694 Query 25188 GAT--TCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGT 25245 ||| || | || | | || |||||||| ||||| |||||||| || || | || Sbjct 43695 GATGGTCGTACCCTCT--CAGACTACAATATCCAAAAAGAATCTACCCTCCATTTAGTTC 43752 Query 25246 TACGATTACGAGGAGG 25261 | ||||| |||| || Sbjct 43753 TCAGATTAAGAGGTGG 43768 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| ||||| || || ||||| ||||| ||| ||| || Sbjct 43314 ATGCAAATTTTTGTCAAGACATTAACTGGTAAAACTATTACTCTTGAAGTCGAAGGTTCA 43373 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | || || ||| |||||||||||| | || ||||||| Sbjct 43374 GATACCATTGAAAACGTTAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 43433 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || || || || || ||||| |||||| | || | | || |||||| Sbjct 43434 CAACGTTTAATTTTCGCCGGTAAGCAATTAGAAGATGGCCGTACACTCTCTGACTACAAT 43493 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||||||||||| || | || ||| ||||| |||| || Sbjct 43494 ATTCAAAAGGAATCTACTCTCCATTTAGTATTAAGATTAAGAGGTGG 43540 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || ||||||| || || || ||||||||||| ||| ||| | || Sbjct 43086 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGGCTCA 43145 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | |||| || ||| |||||||||||| | || ||| ||| Sbjct 43146 GATACCATCGAGAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAA 43205 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || ||||| || |||||||| ||||| ||| | | ||||| ||| Sbjct 43206 CAACGTTTAATTTTTGCAGGTAAACAATTAGAAGACGGTCGTACTCTCTCAGATTATAAT 43265 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||| ||||||||||| || | || | ||||| |||| || Sbjct 43266 ATCCAAAAAGAATCTACTCTCCATTTAGTACTTAGATTAAGAGGTGG 43312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410792799737786