Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq86 107 2e-18 seq246 93.3 4e-14 seq7 91.5 2e-13 >seq86 Length=87693 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || || || |||||||||||| |||| ||||||| | | Sbjct 63068 ATGCAAATTTTCGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63127 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | ||||| |||| || |||| || ||||| || ||||| | || || Sbjct 63128 GATACCATCGAAAACG-TCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCA 63186 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||| | || || ||||| | || || | || || ||| |||||||| Sbjct 63187 ACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 63246 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || || || | || || ||| |||| || Sbjct 63247 CATTCAAAAAGAATCAACTCTCCATTTAGTTTT 63279 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || |||||||||||| |||| ||||||| | | Sbjct 63752 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63811 Query 40750 GACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || ||||| |||| || |||| ||||| || || ||||| | || || Sbjct 63812 GATACCATTGAAAACG-TCAAAACCAAGATTCAAGACAAGGAAGGTATCCCACCAGATCA 63870 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||| | || || ||||| | || || | || || || ||||| || Sbjct 63871 ACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAA 63930 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || || || | || || ||| |||| Sbjct 63931 CATTCAAAAAGAATCAACTCTCCATTTAGT 63960 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || |||||||||||| |||| ||||||| | Sbjct 63296 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 63355 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| | || ||||| | |||||||| || ||||| | ||||| Sbjct 63356 GATACCATTGAAAATGTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 63415 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || || | ||| || ||||| | || || | || || || || ||||| Sbjct 63416 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 63475 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || || || || | || || ||| |||| Sbjct 63476 ATTCAAAAAGAATCAACTCTCCATTTAGT 63504 >seq246 Length=49296 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| |||||||| || |||||||| || || ||||||||||||||| | || ||||||| Sbjct 11271 AAACATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACCATCACCTTAGAGGTCGAAGG 11212 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | || | | ||| | || | ||||| | || ||||| || ||||| | || Sbjct 11211 TTCTGATACTATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATCCCACCAGA 11152 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 || ||| |||| |||| || || ||||| | || || | || || || |||||| Sbjct 11151 TCAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTA 11092 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || || || || | || || ||| |||| || Sbjct 11091 CAATATTCAAAAAGAATCTACCCTCCATTTAGTTTT 11056 >seq7 Length=199231 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| || || ||||| | || || |||||||||||| |||| ||||||| Sbjct 42855 AATATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGT 42914 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | | ||| | || ||||| | || ||||| || ||||| | ||| Sbjct 42915 TCAGATACCATTGAAAATGTTAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAGAC 42974 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || ||||| | || | ||| || ||||| | || || | || || ||| |||||| Sbjct 42975 CAACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTAC 43034 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| || || | || || ||| |||| | | ||||| || || Sbjct 43035 AACATCCAAAAAGAATCTACCCTCCATTTAGTTCTCAGATTGAGAGGTGG 43084 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| | || || |||||||||||| |||| ||||||| | Sbjct 43770 ATGCAAATTTTTGTCAAAACATTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 43829 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | ||||| | || |||| | | || ||||| || || || | ||||| Sbjct 43830 GATACCATTGAAAACGTTAAAACTAAAA-TCCAAGATAAAGAAGGTATTCCACCAGACCA 43888 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| | || | ||| || ||||| | || || | || || ||| |||||||| Sbjct 43889 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 43948 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| || || | || || ||| |||| | | ||||| || || Sbjct 43949 CATCCAAAAAGAATCTACCCTCCATTTAGTCCTCAGATTGAGAGGTGG 43996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214054248240