Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq242 116 3e-21 seq86 116 3e-21 seq246 109 5e-19 >seq242 Length=49570 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | || || |||| || || |||||||||||||||||||| Sbjct 4061 TACCACCTCTTAATCTAAGGACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAG 4120 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | |||||||| || | |||||||| || ||||| || | Sbjct 4121 AAAGAGTACGACCATCTTCTAATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTG 4180 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| ||||| |||||| | ||| | || || | || || | Sbjct 4181 GGATACCTTCTTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCTGAGCCTTCAA 4240 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | ||||| || || |||||||| |||||||| ||||| Sbjct 4241 CTTCTAAGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCAT 4289 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || | |||||| | || || |||| || || ||||||||||||||||| || Sbjct 3606 ACCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGA 3665 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||| || ||| || | ||||| || || | || || | || ||||| || || Sbjct 3666 AAGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGG 3725 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || || |||||| |||||| |||||| | ||| | || || | || || || Sbjct 3726 GATACCTTCTTTGTCTTGAATTTTAGTTTTAACGTTTTCAATAGTATCTGAGCCTTCAAC 3785 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||||| ||||| | |||||| || ||||| ||||| Sbjct 3786 TTCTAAAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 3833 >seq86 Length=87693 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | || || |||| || || ||||||||||| |||||||| Sbjct 63524 TACCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAG 63465 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| |||||| | || ||||| || || || || | Sbjct 63464 AAAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTG 63405 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||||| |||||| | ||| | ||| || | | |||| Sbjct 63404 GGATACCTTCTTTGTCTTGGATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGA 63345 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| ||| | ||||| || || || ||||| |||||||| ||||| Sbjct 63344 CTTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCAT 63296 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || | |||||| | || || |||| || || |||||||||||||| || || Sbjct 63979 ACCACCTCTTAATCTGAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGA 63920 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||| || ||| || | ||||| || || | |||||||| || ||||| || || Sbjct 63919 AAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGG 63860 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||||||| ||| || ||| || | ||| | ||| || | || ||||| Sbjct 63859 GATACCTTCCTTGTCTTGAATCTTGGTTTTGACGTTTTCAATGGTATCTGAGCCTTCGAC 63800 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| ||| | ||||| || || || ||||| |||||||| ||||| Sbjct 63799 TTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCAT 63752 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| || || || |||| || || ||||||||||||||||| || Sbjct 63296 TACCACCACGGAGTCTTAAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAG 63237 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| || || | |||||||| || ||||| || | Sbjct 63236 AGAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTG 63177 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| ||| || ||| || | ||||| ||| || | || |||| Sbjct 63176 GGATACCTTCTTTATCTTGAATCTTGGTTTTGACGTTTTCGATGGTATCTGAGCCTTCGA 63117 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| ||| | ||||| || || || ||||| || ||||| ||||| Sbjct 63116 CTTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACGAAAATTTGCAT 63068 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | || || |||| || || ||||||||||| || || || Sbjct 63068 TACCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTATAGTCAG 63009 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| ||||| | |||||||| || || || || | Sbjct 63008 AAAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTG 62949 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||||| |||||| | ||| | ||| || | || || | Sbjct 62948 GGATACCTTCTTTGTCTTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAGCCTTCTA 62889 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || || || ||||| |||||||| ||||| Sbjct 62888 CCTCAAGGGTAATGGTCTTACCAGTAAGTGTTTTAACAAAAATTTGCAT 62840 >seq246 Length=49296 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| || || || |||| ||||| ||||||||||| ||||| ||| Sbjct 11039 TACCACCACGAAGTCTTAAAACTAAATGGAGGGTAGATTCTTTTTGAATATTGTAGTCGG 11098 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| || || |||| || | || ||||| || | Sbjct 11099 AAAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCTGGTG 11158 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| ||||| ||| || | ||| | || || | | |||| Sbjct 11159 GGATACCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAACCTTCGA 11218 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| | ||| | |||||||| || || |||||||||||||| |||||| Sbjct 11219 CCTCTAAGGTGATGGTTTTGCCAGTAAGGGTTTTTACAAAAATTTGCATG 11268 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || | |||||| || || || || | || || ||||||||||| ||||| ||| Sbjct 10584 ACCACCTCTTAATCTTAATACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAGTCGGA 10643 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||| || ||| || | ||||| || || | |||||||| || ||||| || || Sbjct 10644 AAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGG 10703 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || || || ||| ||||| ||| || | ||||| ||| || | | ||||| Sbjct 10704 GATACCTTCTTTATCTTGGATTTTGGCTTTTACATTTTCGATGGTATCAGAACCTTCGAC 10763 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||||| || || | |||||||||||||| ||||| Sbjct 10764 TTCTAAAGTAATGGTTTTACCAGTTAAGGTTTTTACAAAAATTTGCAT 10811 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| || || || || | || || ||||||||||| || || ||| Sbjct 10811 TACCACCACGAAGTCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGG 10870 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| || || | |||||||| || ||||| || | Sbjct 10871 AAAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTG 10930 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||||| ||| || | ||||| ||| || | | |||| Sbjct 10931 GGATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCGATGGTATCAGAACCTTCGA 10990 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || || || | |||||||||||||| ||||| Sbjct 10991 CTTCTAAGGTGATAGTCTTACCAGTTAAGGTTTTTACAAAAATTTGCAT 11039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433826175440908