Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq213 132 4e-26 >seq213 Length=53756 Score = 132 bits (146), Expect = 4e-26 Identities = 209/299 (70%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 ||| ||||||| ||||| | ||||| || | | ||||| ||||||||||| || | Sbjct 48358 ACATGCAAAATTGCAATGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAA 48299 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 ||||||||||| |||| || || | ||| || ||| ||| |||| || || Sbjct 48298 ACCTGGCATTAAACCTCTCTTCTTTAACCAGAAAATACTACAAAAACTACCACTGAAAAA 48239 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACG---TTCTAtttttact 16410 ||||| || |||||||||||||||||||| || || | | | ||||| ||| Sbjct 48238 GATACCCTCTACTGCGGCAAATGCAACCAAACGTTCTGCAAAAGAATCACTATTATTA-- 48181 Query 16411 ttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGC 16470 ||||||||| ||||||| ||||| | ||||| ||| ||| | |||||||| Sbjct 48180 ----ATCCATTTTAATGCCCAATCAGCTTTCTTTTTAATACATGGAATGGTATCTATTGC 48125 Query 16471 ATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTAT 16529 ||||||| | | |||||| | ||||| |||||| ||||| |||| | ||||| Sbjct 48124 GTTAAATAGTTTACTTTTTTGCTCATTATCTTTAATATATGTATCAATTAAAAGACTAT 48066 Score = 95.1 bits (104), Expect = 1e-14 Identities = 216/320 (68%), Gaps = 5/320 (2%) Strand=Plus/Minus Query 16533 TTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATA 16592 |||| || |||||||| || ||||| || || ||||||||||| ||||||||||| | | Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 16593 TTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTG 16652 |||| || ||| || || || | |||||||| || || ||||| ||| | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 16653 CAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAAAGTTT--TA-ACC 16709 |||| || || | | | |||||||| ||||||||| ||||| || || Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACTACTCC 47813 Query 16710 AGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCT 16769 | || | |||| || | ||| | |||||| | ||||||||| || | || | Sbjct 47812 AATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCTT 47753 Query 16770 TTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATACTTAT-TTAAT 16828 ||||||||| |||| || ||| ||| || ||||| | ||| | ||| || || Sbjct 47752 GTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATCTTTAT 47693 Query 16829 GTTGGTTTTAAAATAGGTTC 16848 || ||||||||| ||||| Sbjct 47692 -TTTCTTTTAAAATTGGTTC 47674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462507380661400