Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq246 131 1e-25 seq242 114 1e-20 seq86 102 6e-17 seq7 84.2 2e-11 >seq246 Length=49296 Score = 131 bits (144), Expect = 1e-25 Identities = 173/236 (73%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || ||||| | || | || || || |||||||||||||| |||||||||| Sbjct 11041 CCACCACGAAGTCTTAAAACTAAATGGAGGGTAGATTCTTTTTGAATATTGTAGTCGGAA 11100 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| ||||||||||||||||||| || Sbjct 11101 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCTGGTGGG 11160 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| |||| | || || || | | ||| ||| ||| ||| Sbjct 11161 ATACCTTCTTTATCTTGGATTT-TAGCTTTTACATTTTCAATAGTATCAGAACCTTCGAC 11219 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT-TTTTAAA 18332 || | ||||||| ||||||| || | |||||||||||||||||||| ||||||| Sbjct 11220 CTCTAAGGTGATGGTTTTGCCAGTAAGGGTTTTTACAAAAATTTGCATGTTTTAAA 11275 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || ||| | ||| | ||||| ||||||||||||||||| |||||||||| Sbjct 10585 CCACCTCTTAATCTTAATACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAGTCGGAA 10644 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| | || || | ||||||||| || Sbjct 10645 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 10704 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| |||| | || || || | | | | || ||| ||| Sbjct 10705 ATACCTTCTTTATCTTGGATTT-TGGCTTTTACATTTTCGATGGTATCAGAACCTTCGAC 10763 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| |||| || || || |||||||||||||||||||| Sbjct 10764 TTCTAAAGTAATGGTTTTACCAGTTAAGGTTTTTACAAAAATTTGCAT 10811 >seq242 Length=49570 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || |||||| || | || || |||||||||||||||||||||||||| | Sbjct 3607 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAA 3666 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| | ||||||||||||||||| || Sbjct 3667 AGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGG 3726 Query 18219 ACGCCTTCCTTATCGGCAATTT--GTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||| || || ||||| ||| || || | | ||| ||| || | || Sbjct 3727 ATACCTTCTTTGTCTTGAATTTTAGTT--TTAACGTTTTCAATAGTATCTGAGCCTTCAA 3784 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| |||| ||||| || ||||| || ||||||||||| Sbjct 3785 CTTCTAAAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 3833 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || ||||| | ||| | || || |||||||||||||| ||||||||||| | Sbjct 4519 CCACCACGGAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAG 4578 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| | ||||||||||||||||| || Sbjct 4579 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGA 4638 Query 18219 ACGCCTTCCTTATC-GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| | | |||| | ||| || | | ||| || ||| | || Sbjct 4639 ATTCCTTCTTTATCTTGGATTTTGGT-CTTTACATTTTCAATGGTATCAGAGCCTTCTAC 4697 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| | ||||| || | ||||| |||||||||||||| Sbjct 4698 TTCTAAAGTAATGGTCTTGCCAGTAAGAGTTTTAACAAAAATTTGCAT 4745 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || |||||| || | || || |||||||||||||| || || ||||| | Sbjct 4291 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAA 4350 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| | ||||||||||||||||| || Sbjct 4351 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGG 4410 Query 18219 ACGCCTTCCTTATC-GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| | | |||| | ||||| | | ||| || || | ||| Sbjct 4411 ATACCTTCTTTATCTTGGATTTTGGT-TTTGACGTTTTCAATTGTATCTGAGCCTTCGAC 4469 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||| ||| |||| || || | ||||| |||||||||||||| Sbjct 4470 TTCGAGGGTAATGGTTTTACCAGTAAGGGTTTTAACAAAAATTTGCAT 4517 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || |||||| || | || || ||||||||||||||||||||||| || | Sbjct 4063 CCACCTCTTAATCTAAGGACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAA 4122 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| | || || | ||||||||| || Sbjct 4123 AGAGTACGACCATCTTCTAATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGGG 4182 Query 18219 ACGCCTTCCTTATC--GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||| ||||| || || ||| || || | | ||| ||| || | || Sbjct 4183 ATACCTTCTTTATCTTGGATTTTAGTT--TTAACATTTTCAATAGTATCTGAGCCTTCAA 4240 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | |||||| |||| || || | ||||| |||||||||||||| Sbjct 4241 CTTCTAAGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCAT 4289 >seq86 Length=87693 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || ||| || || | || || |||||||||||||||||||| ||||| | Sbjct 63978 CCACCTCTTAATCTGAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGAA 63919 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| | || || | ||||||||| || Sbjct 63918 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 63859 Query 18219 ACGCCTTCCTTATCGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||||| || ||| ||| | ||||| | | ||| || || | ||| Sbjct 63858 ATACCTTCCTTGTCTTGAATCTTGGT-TTTGACGTTTTCAATGGTATCTGAGCCTTCGAC 63800 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||||| |||| || || | ||||| |||||||||||||| Sbjct 63799 TTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCAT 63752 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || ||||| | || | || || |||||||||||||||||||||||||| | Sbjct 63294 CCACCACGGAGTCTTAAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAG 63235 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || ||| | || || | ||||||||| || Sbjct 63234 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 63175 Query 18219 ACGCCTTCCTTATCGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| ||| ||| | ||||| | | | | || || | ||| Sbjct 63174 ATACCTTCTTTATCTTGAATCTTGGT-TTTGACGTTTTCGATGGTATCTGAGCCTTCGAC 63116 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||||| |||| || || | ||||| || ||||||||||| Sbjct 63115 TTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACGAAAATTTGCAT 63068 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || |||||| || | || || ||||||||||||||||| ||||| || | Sbjct 63522 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAA 63463 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| |||||||| || || | ||||| | |||||| || || Sbjct 63462 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGG 63403 Query 18219 ACGCCTTCCTTATC-GGCAATTTGTTGCTTGACCTGTGCAACAGTGTC---ACCGGGCTC 18274 | ||||| || || | | |||| | || || | | ||| || || ||| || Sbjct 63402 ATACCTTCTTTGTCTTGGATTTTGGT-TTTAACATTTTCAATGGTATCTGAACC---TTC 63347 Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | ||| | ||||||| |||| || || | ||||| |||||||||||||| Sbjct 63346 GACTTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCAT 63296 >seq7 Length=199231 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/221 (69%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || || | || || || ||||||||||| ||||||||||| | | || || Sbjct 43985 TCTGAGGACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 43926 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| |||||||| || || | || | | |||||| || || | ||||| || Sbjct 43925 ATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGAATACCTTCTTT 43866 Query 18230 ATCGGCAATTT--GTTGCTTGACCTGTGCAACAGTGTC---ACCGGGCTCGGTTTCAATG 18284 ||| |||| ||| || || | | ||| || || ||| ||| ||| | | Sbjct 43865 ATCTTGGATTTTAGTT--TTAACGTTTTCAATGGTATCTGAACCT---TCGACTTCGAGG 43811 Query 18285 GTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||| |||| || || |||||||| |||||||||||||| Sbjct 43810 GTGATGGTTTTACCAGTTAATGTTTTGACAAAAATTTGCAT 43770 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/226 (69%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || || | || || || ||||||||||| ||||||||||| | | || || Sbjct 43073 TCTGAGAACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 43014 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| |||||||| || || | || | | |||||| || || | ||||| || Sbjct 43013 ATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGGATACCTTCTTT 42954 Query 18230 ATC-GGCAATTTGTTGCTTGACCTGTGCAACAGTGTC---ACCGGGCTCGGTTTCAATGG 18285 ||| | | |||| | || || | | ||| || || ||| ||| ||| | || Sbjct 42953 ATCTTGGATTTTGGT-TTTAACATTTTCAATGGTATCTGAACC---TTCGACTTCGAGGG 42898 Query 18286 TGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331 ||||| |||| || || || ||||| |||||||||||||| || || Sbjct 42897 TGATGGTTTTACCAGTTAAAGTTTTGACAAAAATTTGCATATTGAA 42852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379340306019255