Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq230 307 1e-78 seq213 140 3e-28 >seq230 Length=51241 Score = 307 bits (340), Expect = 1e-78 Identities = 1183/1832 (65%), Gaps = 82/1832 (4%) Strand=Plus/Plus Query 36834 ATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTT 36893 ||| ||||| |||||||| || || | |||| ||| |||||||| || ||||| Sbjct 28025 ATAGTACATACCAGTTTTGAGACCTTTTTTCCAAGAGTAGAAATGCATTGATGTAAGTTT 28084 Query 36894 TGCGTATGTAGGATTATCTATATATATTGTCATTGA----TTGACTTTGATCTATAAACG 36949 || | || || | | | ||| | | |||||| |||||||||||| ||||| | Sbjct 28085 AGCAAAAGTTGGTTCAGCAATAAAAA----CATTGAAACTTTGACTTTGATCAATAAAAG 28140 Query 36950 CACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTAT 37009 |||| | || || ||||| || | | | |||| || |||||||| ||||| | Sbjct 28141 CACCACGATCAGCAGCCATATCAATTAATGTTCTTTGTCTAATTTCCCAAACTGTTTTGT 28200 Query 37010 ATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACA 37066 | | || ||| | || |||||| | | | | |||||| |||||| | | | Sbjct 28201 AAAGTTCTTTAAGATCATCTGGAATGGATGGGATACTTTGAATTGAACCACGGTTGAGAA 28260 Query 37067 CAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTT--ATTAGTTCTCTCAATAG 37124 | ||| |||||||| || | | || ||| ||| | || || ||| | || Sbjct 28261 CGATTTGATTCTTTAATTC--TGGTGACCAAATTCCTAACTCCATGAGATCTTCGAGAAG 28318 Query 37125 GTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGT 37184 ||| ||| |||| ||| || |||| ||| || | | | || || || || || Sbjct 28319 TTGTTTATTGACAATAGTAAATTCACCAGCTAAAACACGACGACTGTAAATGTTACTGGT 28378 Query 37185 ATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGG 37244 ||||||||||| | | || || |||| ||| ||||| || || |||||||| |||||||| Sbjct 28379 ATATGGTTCAAAGCATTCGTTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGGCATTGG 28438 Query 37245 TGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAA---TTCTCTTTTTTAGTTCATT 37301 |||||||| ||| || | | ||| | |||||| || | | ||| || ||| | Sbjct 28439 TGCTATTAAAAGTGAGTTACGAAGACCACCTTTATTAACAATTTTATCTTTGAGATCAGT 28498 Query 37302 CCAATCCCATAAATCTGTTGGGTT--CTTTAACCACATATCATATTGTAGAATACCTTTA 37359 ||| | ||| || |||||| | | || ||| | ||| ||||| |||||||||| Sbjct 28499 CCAGTTCCAACGATTTGTTGGTGTAACATT--CCAGAAATCGTATTGGAGAATACCTTGG 28556 Query 37360 CTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTA 37419 || ||||| ||| | ||| |||| ||||| || || | ||| || || ||| Sbjct 28557 CTGGCTGGTGAACCTTTAAATGTTTCATATGGACCTTCAATAAGAGATAACTCGTGT--- 28613 Query 37420 GATTCT---AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCT 37476 ||| || || || ||| |||| || ||||| ||||| || |||||| ||||| Sbjct 28614 GATGCTGTAAGGGCAGCAAAATAAATAGTTTCTGCAATTTCAATGTTTAAT---TTTGCG 28670 Query 37477 TCTTCGCTA---TCGAATG-CATAGCCCAATAATATAAACACATCAGCCAAACCCTGAAC 37532 | || || || |||| |||| | | | || || |||||||| | ||| |||| Sbjct 28671 GCAGCGGTACCATCAAATGGCATA-CGAAGTTGAATGAAAACATCAGCAAGACCTTGAAT 28729 Query 37533 ACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATA 37592 ||| ||||| || || | |||| | |||||| | | |||| |||||||| || Sbjct 28730 ACCAATACCAATTGGACGATGTCTTAAATTAGAGGTTTTGGCTTCTTGAACTGGATAGTA 28789 Query 37593 ATTGATATCTATTATTTTATTTAGATTTTT---AAC-----TAGTATTTTCGTAA----- 37639 || ||| || ||||| || ||||| || ||| |||| |||| ||| Sbjct 28790 GTTACGATCAATAATTTTGTTAAGATTCTTGGTAACAATTTTAGTGATTTCATAAAGTTT 28849 Query 37640 -TTATTCTCAA---------CTTGTCGAACA--TAAA--TACGTTATTATTAACAAATTT 37685 | || |||| ||| | || | || | | || || || ||||| Sbjct 28850 TTGATGATCAAATTCTTTTTCTTTTGGATTGGTTGAACCTTCTTTTCTACGAATGAATTT 28909 Query 37686 ACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTAT 37745 || | ||| ||| | |||||||||||||||| |||||| | | |||| || Sbjct 28910 TGGTAAGGCAATGGATGCGAGATTACATACAGCAATCTCATCTGGGGATGTGTATTGAAT 28969 Query 37746 AATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTT 37805 ||| || ||||| |||||||| ||||| || || | ||| ||||||||||||| Sbjct 28970 AATTTCGGTACAAAGATTACTGCTGCTAATAGTACCAAGATTCTTTTGATTGGATTTAGA 29029 Query 37806 ATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAAT 37865 |||||||||||||||||| || ||| | || || || ||| | ||||| ||| || || Sbjct 29030 ATTACAAGAATCTTTATAGAGAATAAATGGTGTACCAGTTTCAACTTGAGACTCCATGAT 29089 Query 37866 AGATTTCCATAAACTTCTTG--CTTTAACGATCGCTTTA---AtttttttCTTTGTTTCG 37920 | ||| || |||||| |||||| | | || | | | |||| Sbjct 29090 TGCAAACCA--AAGTTCTTGAGCTTTAATTACACGTCTAGCAAGGCCTGGTGTATTTTCA 29147 Query 37921 TATTCTATATATAATTTGTTAAAATCATTCCCCCATACAT-CGCATAATCCTGGACATTC 37979 |||| | ||| | || | || ||| | | || | | ||| ||| Sbjct 29148 TATTTGAGATAAAGTTCACGATGTTC-TTCTGAGTGAGTTTCGTCAAGACGTGGGGCTTC 29206 Query 37980 GCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGG 38039 | ||||| | || ||||| ||| | | || |||||| | |||||| || | ||| Sbjct 29207 GTTAGGACAAAAGAGTGACCAATCTCCGTTTTGTTCTACTCTTTCCATGAAAAGATCGCT 29266 Query 38040 TACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCT 38099 ||||| | || ||| | |||| ||| ||| |||||| || || ||||||| | Sbjct 29267 GACCCAAAGAGCGTAAAAGAGATCTCTGGCTCTCATTTCTTCCTTACCATGATTCTTT-T 29325 Query 38100 TAAGCTTAGAAAAT-CGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTC 38158 | || | | |||| | || ||||| | |||||||||||| | ||| | | | || | Sbjct 29326 TGAGTTCAATAAATTCAAAAATATCTGAGTGCCATGGTTCGAGATATACTGCAAAGGCAC 29385 Query 38159 CTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACA 38218 || ||||||| |||| || |||| | ||| | | | || | ||| | | | | || Sbjct 29386 CTTTTCTTTTACCACCACCTTGATCTACATAACGAGCAGTATCATTGAAAACACGGAGCA 29445 Query 38219 TAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTA 38278 | ||||| | ||||||| |||| || |||| |||||| | || || | Sbjct 29446 TTGGTACCAAACCATTACTGGTGCCATTGGTACCACGAATATAACTTTGAGCGGCACGAA 29505 Query 38279 TATTACTTATCGA-CAAT-CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTT 38336 | ||| | | | |||| ||||| ||||||||| |||||| |||||||| |||||||| Sbjct 29506 TCTTA--TGGCAAGCAATACCTATACCACCTGCAGATTTTGAAATTAAAGCACATTGTTT 29563 Query 38337 TAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGA 38396 | |||||| | ||||| || || || || || ||| | | || ||| || || Sbjct 29564 GAGGGTATCATAAATACCATCGATTGAATCCTCTTTCATTTGAACTAAAAAGCATGAGGA 29623 Query 38397 CATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTT 38456 |||||| || |||| || || || || || | || || | |||||| | || ||| Sbjct 29624 CATTTGTGGGTATGGTGTACCAGCATTGAAAAGAGTTGGTGTGGCATGTGTAAAGAGTTT 29683 Query 38457 TTCCGAC--AAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCT 38514 || ||| || | | || || ||| ||| || ||||| || |||||||| Sbjct 29684 TT--GACTTAATTTCTCGTAGGTAAGAATTGCATTGTCGATATCGTTACCATGAATACCG 29741 Query 38515 AGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGT 38574 | ||| || | ||||||||| |||||||| | ||| | || |||| || | | Sbjct 29742 ATAGAAACACGCATTAGCATGTGTTGTGGACGTTCAACGATGCTATTGTTGATACGATGA 29801 Query 38575 AGATACGATTTTTCTAATGTTTTTATTCCAAA 38606 ||||| || |||||||||||| | ||||| Sbjct 29802 AGATATGAACGTTCTAATGTTTTGAAACCAAA 29833 >seq213 Length=53756 Score = 140 bits (154), Expect = 3e-28 Identities = 308/455 (68%), Gaps = 14/455 (3%) Strand=Plus/Minus Query 11474 AATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCA 11533 ||||| || || ||||||||| ||| || ||||||||| || | ||| || || | || Sbjct 48513 AATTCAATGTATTGAGACATTGAACGACTATTCATACCAATTAAATCTACTGGTAAAG-- 48456 Query 11534 ACTGTCAAA--AACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTTATAACTT 11591 | | |||| || || ||||| | ||| ||||| | || || | | | | | | Sbjct 48455 AGTCACAAATAAATTCTTTTTCGCAAACAACGGCATCTCTAATAATGG-CTTCAAGAGT- 48398 Query 11592 CCTTAGATG---GTGGATGTAATAAAT--GTTTAAACATTAAACACGCAAAATCACAATG 11646 ||| ||| || | || ||| | || || | | | ||| ||||||| ||||| Sbjct 48397 -CTTGGATTCGAGTTTGTTTATTAATTTGGTGTATAAA--AGACATGCAAAATTGCAATG 48341 Query 11647 TAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCG 11706 | |||||| || | | |||| ||| || ||||| ||||| || ||||| || |||| Sbjct 48340 AAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCTCT 48281 Query 11707 tttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGC 11766 || |||| ||| || ||| | ||| |||| || || || ||||| || || || Sbjct 48280 CTTCTTTAACCAGAAAATACTACAAAAACTACCACTGAAAAAGATACCCTCTACTGCGGC 48221 Query 11767 AAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATATCCATTTTCTGGCCCAATC 11826 |||||| || | | |||| || | | | || ||||||||| |||||||| Sbjct 48220 AAATGCAACCAAACGTTCTGCAAAAGAATCACTATTATTAATCCATTTTAATGCCCAATC 48161 Query 11827 AGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAATGCATTTTTTCTAT 11886 |||||||||||| | ||| || || ||||| |||||||||| | |||||| Sbjct 48160 AGCTTTCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTACTTTTTTGCTC 48101 Query 11887 ATTATCTCTTACATATGTATCTATTAATAAACTAT 11921 ||||||| | | ||||||||| ||||| | ||||| Sbjct 48100 ATTATCTTTAATATATGTATCAATTAAAAGACTAT 48066 Score = 122 bits (134), Expect = 8e-23 Identities = 244/352 (69%), Gaps = 16/352 (5%) Strand=Plus/Minus Query 11866 AAATAAAT--GCATTTTTTCTATATTATCTCTTACATATG-TATCTATTAATA---AACT 11919 ||| |||| | ||||||| ||| || | | ||| | | ||| | |||||| | || Sbjct 48056 AAAAAAATTAGTATTTTTTATATGTTTTTT-TTATTTTTAATATTTTTTAATATTTACCT 47998 Query 11920 ATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC 11979 || |||| || ||||||||||| || || ||||| || ||||| ||||||| || || Sbjct 47997 GTAAGTTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTC 47938 Query 11980 TGAACACTGTACATC-CACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCAC 12038 || | || || || | ||| || ||| || | ||| || ||||||||||||||| Sbjct 47937 TGGAATTTGGACCTCACTCATGAA-TCTAGTGGCAAGATTTTCGTTTACAATACCATCAG 47879 Query 12039 TAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTC----TTTAGTTAAT 12094 || ||||| ||||||| | || ||||| | ||||| || |||| | Sbjct 47878 AAGCGGCAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTAC 47819 Query 12095 TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCC 12154 | ||| |||| | | |||| || | ||| | |||||| | |||||||||||||| Sbjct 47818 TACTCC-AATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCT 47760 Query 12155 ACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAA 12206 ||| |||||||||||| |||||||||| | || || || || |||||| Sbjct 47759 TCTGCTTGTTTATACATACTCCAGATATCTGGGTATTTTATTGG--AAATAA 47710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468520120608560