Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq246 105 7e-18 seq86 100 3e-16 seq242 91.5 1e-13 seq14 87.8 2e-12 >seq246 Length=49296 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 |||||||| |||| || || ||||||||||| ||||| ||| | || | ||| Sbjct 10828 AAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAAAGAGTACGACCATCT 10887 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || | |||||||| ||| | || |||||||| ||||| || || || ||||||||||| Sbjct 10888 TCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTCT 10947 Query 139673 GTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTC 139732 |||||| ||||| | ||| | || || | || || || | ||| | ||| Sbjct 10948 TGGATTTTAGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAGGTGATAGTC 11007 Query 139733 TTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || || || |||||||| || ||||||||| Sbjct 11008 TTACCAGTTAAGGTTTTTACAAAAATTTGCATA 11040 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 |||||||| || | ||||| ||||||||||| || || ||| | || | ||| Sbjct 11056 AAAACTAAATGGAGGGTAGATTCTTTTTGAATATTGTAGTCGGAAAGAGTACGACCATCT 11115 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || | |||||||| ||| |||| || | ||| ||||| || || || |||||||| || Sbjct 11116 TCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTATCT 11175 Query 139673 GTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTC 139732 |||||| ||||| | ||| | || || | || ||||| | ||| | || Sbjct 11176 TGGATTTTAGCTTTTACATTTTCAATAGTATCAGAACCTTCGACCTCTAAGGTGATGGTT 11235 Query 139733 TTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || | |||||||| || |||||||| Sbjct 11236 TTGCCAGTAAGGGTTTTTACAAAAATTTGCAT 11267 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | || ||||| |||| || || ||||||||||| || || ||| Sbjct 10585 CCACCTCTTAATCTTAATACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAGTCGGAA 10644 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | |||||||| ||| | || |||||||| ||||| || || Sbjct 10645 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 10704 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || |||||||| || |||||| ||||| | ||| | || || | || || Sbjct 10705 ATACCTTCTTTATCTTGGATTTTGGCTTTTACATTTTCGATGGTATCAGAACCTTCGACT 10764 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || || || || |||||||| || ||||||||| Sbjct 10765 TCTAAAGTAATGGTTTTACCAGTTAAGGTTTTTACAAAAATTTGCATA 10812 >seq86 Length=87693 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | |||||| || | || || ||||||||||| ||||| || Sbjct 63066 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTATAGTCAGAA 63007 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | |||||||||||| | || |||||||| || || || || Sbjct 63006 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGG 62947 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| || |||| |||||| | | ||| | || || | | || || Sbjct 62946 ATACCTTCTTTGTC-TTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAGCCTTCTAC 62888 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| ||| | ||||| || || | ||||| || || ||||||||| Sbjct 62887 CTCAAGGGTAATGGTCTTACCAGTAAGTGTTTTAACAAAAATTTGCATA 62839 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 |||||||| || | || || |||||||||||||| || || | || | ||| Sbjct 63279 AAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTACGACCATCT 63220 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || | |||||||| ||| | || |||||||| ||||| || || || |||||||| || Sbjct 63219 TCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATC- 63161 Query 139673 GTGATTTTTTGTTTT-AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| | || ||||| | | ||| | || || | | || || || | ||| | || Sbjct 63160 TTGAATCTTGGTTTTGACGTTTTCGATGGTATCTGAGCCTTCGACTTCGAGGGTGATGGT 63101 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || || | ||||| ||||| ||||||||| Sbjct 63100 TTTACCAGTAAGGGTTTTGACGAAAATTTGCATA 63067 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | |||||| || | || || ||||||||||||||||| || Sbjct 63978 CCACCTCTTAATCTGAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGAA 63919 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | |||||||| ||| | || |||||||| ||||| || || Sbjct 63918 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 63859 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTT-AGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || ||||| | | ||| | || || | | || || Sbjct 63858 ATACCTTCCTTGTC-TTGAATCTTGGTTTTGACGTTTTCAATGGTATCTGAGCCTTCGAC 63800 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | || || || || | ||||| || || ||||||||| Sbjct 63799 TTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCATA 63751 >seq242 Length=49570 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | |||||| || | || || |||||||||||||| || || Sbjct 3607 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAA 3666 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | |||||||| ||| | || || | ||| ||||| || || Sbjct 3667 AGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGG 3726 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||| |||||| | | ||| | || || | | || || Sbjct 3727 ATACCTTCTTTGTC-TTGAATTTTAGTTTTAACGTTTTCAATAGTATCTGAGCCTTCAAC 3785 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || ||||| || ||||| ||||| ||||||||| Sbjct 3786 TTCTAAAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATA 3834 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 || ||||| || | || || |||||||| || ||||| || | || | ||| Sbjct 3850 AATACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAGAGAGTACGACCATCT 3909 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || | |||||||||||| | || | |||||| ||||| || || || |||||||| || Sbjct 3910 TCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTTATC- 3968 Query 139673 GTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| | || || |||| | ||| | ||| || | | || || || | || | || Sbjct 3969 TTGAATCTTGGTCTTTACATTTTCAATTGTATCTGAGCCTTCAACTTCTAAAGTAATAGT 4028 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || ||||| || ||||| ||||| ||||||||| Sbjct 4029 TTTACCGGTTAAAGTTTTGACGAAAATTTGCATA 4062 >seq14 Length=162200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| | |||||||||||| | || |||||||| || || || || || ||||||||| Sbjct 64251 TCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCTTCTTTG 64310 Query 139670 TCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || || |||| |||||| | | ||| | || || | | || ||||||| ||| | Sbjct 64311 TC-TTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAGCCTTCTACCTCAAGGGTAAT 64369 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || | ||||| || || ||||||||| Sbjct 64370 GGTCTTACCAGTAAGTGTTTTAACAAAAATTTGCATA 64406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059045560800