Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq230 295 1e-74 seq213 172 8e-38 >seq230 Length=51241 Score = 295 bits (326), Expect = 1e-74 Identities = 1210/1889 (64%), Gaps = 64/1889 (3%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| | | | | || || ||||| ||||||||||| || ||||| ||| Sbjct 27987 GTGAATTGAATAGCATCAGCAGCTGGACGAGTACGGAGATAGTACATACCAGTTTTGAGA 28046 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||| |||||||||||| || ||||| | | || | || || || ||| Sbjct 28047 CCTTTTTTCCAAGAGTAGAAATGCATTGATGTAAGTTTAGCAAAAGTTGGTTCAGCAATA 28106 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 | ||| | | |||||||||||| || || || || | || |||||||| | || Sbjct 28107 AAAACATTGAAACTTTGACTTTGATCAATAAAAGCACCACGATCAGCAGCCATATCAATT 28166 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 | || ||||| ||||||||||| ||||| |||| | |||| ||| ||||||| | Sbjct 28167 AATGTTCTTTGTCTAATTTCCCAAACTGTTTTGTAAAGTTCTTTAAGATCATCTGGAATG 28226 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || || | ||||| || |||| | | || |||||| | ||| | Sbjct 28227 GATGGGATACTTTGAATTGAACCACGGTTGAGAACGATTTGATTCTTTAATTCTGGTGAC 28286 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | | | ||| | | | || || || || ||| || | |||||| ||| Sbjct 28287 CAAATTCCTAACTCCATGAGATCTTCGAGAAGTTGTTTATTGACAATAGTAAATTCACCA 28346 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | || || | ||| ||||||| ||||||||||||||||| | |||| || || || Sbjct 28347 GCTAAAACACGACGACTGTAAATGTTACTGGTATATGGTTCAAAGCATTCGTTGTTACCT 28406 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC- 79193 |||||||| | ||||||||| |||||||| ||||| | || | || | |||||| Sbjct 28407 AAAATTTGTGAAGTTGATGCAGTTGGCATTGGTGCTATTAAAAGTGAGTTACGAAGACCA 28466 Query 79194 ---GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAAC 79250 ||| | | ||||||||||| ||| ||| | |||| ||| | || ||| Sbjct 28467 CCTTTATTAAC-AATTTTATCTTTGAGATCAGTCCAGTTCCAACGATTTGTTGGTGTAAC 28525 Query 79251 ATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATA 79310 |||||| | ||| ||||| |||||||| | || || ||| ||| | |||||||||| Sbjct 28526 ATTCCAGAAATCGTATTGGAGAATACCTTGGCTGGCTGGTGAACCTTTAAATGTTTCATA 28585 Query 79311 AGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAA-TGCTCCGTAATAAATGGTTT 79369 || ||||| | | ||| || | || ||| || | ||||||| |||| Sbjct 28586 TGGACCTTCAATAAGAGATAACTCGTGTGATG-CTGTAAGGGCAGCAAAATAAATAGTTT 28644 Query 79370 CGAAAATCTTCTTATTGAGATCTTG-TGCTTCTAGGCTATCAAATGG-ATAATTTAAG-A 79426 | ||| | | || | || ||| || | | ||||||||| ||| ||| Sbjct 28645 CTGCAATTTCAATGTTTA-ATTTTGCGGCAGCGGTACCATCAAATGGCATA--CGAAGTT 28701 Query 79427 GAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 79486 |||| || | || || | ||||||| ||||||||| || || | |||||| ||||| Sbjct 28702 GAATGAAAACATCAGCAAGACCTTGAATACCAATACCAATTGGACGATGTCTTAAATTAG 28761 Query 79487 AAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGA 79546 | ||| |||||| ||| ||||| || ||| ||| |||||||| || |||||| || Sbjct 28762 AGGTTTTGGCTTCTTGAACTGGATAGTAGTTACGATCAATAATTTTGTTAAGATTCTTGG 28821 Query 79547 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGT---------------- 79590 | | ||| | || | ||||| || ||||||| | Sbjct 28822 TAACAATTTTAGTGATTTCATAAAGTTTTTGATGATCAAATTCTTTTTCTTTTGGATTGG 28881 Query 79591 -----CCATCTAT--TACAAA--CATGTT--CAACGCGACAGATGCCAGATTACAAACGG 79639 || ||| | ||| || || || || || | ||||| |||||||| || | Sbjct 28882 TTGAACCTTCTTTTCTACGAATGAATTTTGGTAAGGCAATGGATGCGAGATTACATACAG 28941 Query 79640 CTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGG 79699 | | ||||| | | ||||| || ||||| || || || ||||| | |||| | Sbjct 28942 CAATCTCATCTGGGGATGTGTATTGAATAATTTCGGTACAAAGATTACTGCTGCTAATAG 29001 Query 79700 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAG 79759 | || | ||| | |||||| || ||||| | ||| ||||| ||||| || || | Sbjct 29002 TACCAAGATTCTTTTGATTGGATTTAGAATTACAAGAATCTTTATAGAGAATAAATGGTG 29061 Query 79760 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA- 79818 |||||||||||| ||||| || || || || ||| | || |||| || |||| | Sbjct 29062 TACCAGTTTCAACTTGAGACTCCATGATTGCAAACCAAAGTTCTTGAGCTTTAATTACAC 29121 Query 79819 GACTTGTA---TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTT--CGA-ACTCGTCT 79872 | || | | || | | | |||| |||| || | |||| ||| ||| || ||| Sbjct 29122 GTCTAGCAAGGCCTGGTGTAT-TTTCATATT-TG-AGATAA-AGTTCACGATGTTCTTCT 29177 Query 79873 CCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCA 79932 | ||||| | | || ||||| |||||| | | ||||| ||||| | Sbjct 29178 GAGTGAGTTTCGTCAAGACGTGGGGCTTCGTTAGGACAAAAGAGTGACCAATCTCCGTTT 29237 Query 79933 TCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTT 79992 | | ||||| || ||| || ||||| | ||||||||| ||| |||||||||| | Sbjct 29238 TGTTCTACTCTTTCCATGAAAAGATCGCTGACCCAAAGAGCGTAAAAGAGATCTCTGGCT 29297 Query 79993 CTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 80052 || || || || || ||||||||| || || | || | | |||||| || ||| Sbjct 29298 CTCATTTCTTCCTTACCATGATTCTTTTTGAGTTCAATAAATTCAAAAATATCTGAGTGC 29357 Query 80053 CACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTAT 80112 || ||||| | |||| || | | || || ||| || || ||||||| || Sbjct 29358 CATGGTTCGAGATATACTGCAAAGGCACCTTTTCTTTTACCACCACCTTGATCTACATAA 29417 Query 80113 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTC 80172 | ||| || | ||| |||| | | |||||| | | |||||| || |||||||| Sbjct 29418 CGAGCAGTATCATTGAAAACACGGAGCATTGGTACCAAACCATTACTGGTGCCATTGGTA 29477 Query 80173 CCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 80232 || ||||| ||| | ||||||||| ||| | | |||||| || ||||| Sbjct 29478 CCACGAATATAACTTTGAGCGGCACGAATCTTATGGCAAGCAATACCTATACCACCTGCA 29537 Query 80233 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCA 80292 ||| || ||||| || ||| |||| | |||||||| || || || || ||| || Sbjct 29538 GATTTTGAAATTAAAGCACATTGTTTGAGGGTATCATAAATACCATCGATTGAATCCTCT 29597 Query 80293 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 80352 |||| | || || ||| || |||||||| | || || ||||| || | Sbjct 29598 TTCATTTGAACTAAAAAGCATGAGGACATTTGTGGGTATGGTGTACCAGCATTGAAAAGA 29657 Query 80353 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGAT 80412 || || | || || ||||| ||||| | | | | ||| || ||| || Sbjct 29658 GTTGGTGTGGCATGTGTAAAGAGTTTTTGACTTAATTTCTCGTAGGTAAGAATTGCATTG 29717 Query 80413 TCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472 || ||||| |||||| || | | |||||||||| |||||| || || | |||| Sbjct 29718 TCGATATCGTTACCATGAATACCGATAGAAACACGCATTAGCATGTGTTGTGGACGTTCA 29777 Query 80473 ACGATCTTGTTATTTATTTTCAACAAGTAAGATTT-----TTCCAAAGTTTTAAAACCAA 80527 ||||| | || || || || | ||||| | ||| || ||||| ||||||| Sbjct 29778 ACGATGCTATTGTTGAT-----ACGATGAAGATATGAACGTTCTAATGTTTTGAAACCAA 29832 Query 80528 AATAGTTGTATGAAAAGTCTCGTTCGTAA 80556 | | | ||| || || |||| |||| Sbjct 29833 AGAAATCGTAATCGAAATCACGTTGGTAA 29861 >seq213 Length=53756 Score = 172 bits (190), Expect = 8e-38 Identities = 387/570 (68%), Gaps = 20/570 (4%) Strand=Plus/Minus Query 49692 TTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGT 49751 ||||||||| || ||||||| || | || || ||||||| ||||||| ||||| | Sbjct 48625 TTCGAAAAAGTTTGTTTTTCTTTGGAGGGAAATCATTTCCATCCAATCAAAAGGATTTGA 48566 Query 49752 AACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT---CTATCCGCGACAAATTC 49808 | |||||||||| |||||| | |||||| || | ||| | ||| || |||||| Sbjct 48565 AGCATTATAAATCTTTTTATAACCCAAT---GAGACCAAAAGACGATCAGCACAAAATTC 48509 Query 49809 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGG--AAGAGCCGCA 49866 || ||| ||| || |||||| || || | | ||||| ||||| | || Sbjct 48508 AATGTATTGAGACATTGAACGACTATTCATACCAATTAAATCTACTGGTAAAGAGTCACA 48449 Query 49867 GTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCA 49926 || |||||||| ||| || |||||| | ||||| | | || || | | | Sbjct 48448 --AATAAATTCTTTTTCGCAAACAACGGCATCTCTAATAATGGCTTCAAGAGTCT-TGGA 48392 Query 49927 CTCG-GTGGATGCAATAAAT--GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCC 49983 ||| || | | ||| | || || | | | |||||| |||| ||| || ||||| Sbjct 48391 TTCGAGTTTGTTTATTAATTTGGTGTATAAA--AGACATGCAAAATTGCAATGAAGACCT 48334 Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || || | | |||| |||||| ||||| || | || ||||||| || | ||| || Sbjct 48333 TCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCTCTCTTCTTT 48274 Query 50044 AGCCAAAATATGG-ACGCAAATGACC-CAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||| || || || ||| ||| | ||||| |||| || |||||||||||||| | Sbjct 48273 AACCAGAAAATACTACAAAAACTACCACTGAAAA--AGATACCCTCTACTGCGGCAAATG 48216 Query 50102 CAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 50161 |||| | | ||| || || | || | || ||||| ||| |||||||| || | Sbjct 48215 CAACCAAACGTTCTGCAAAAGAATCACTATTATTAATCCATTTTAATGCCCAATCAGCTT 48156 Query 50162 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 50221 ||||||| | ||| || || || ||||| || ||||| || | |||||| | | ||| Sbjct 48155 TCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTACTTTTTTGCTCATTAT 48096 Query 50222 CTTTAACATAAGTATCGATCAAAAGACTAT 50251 |||||| ||| ||||| || |||||||||| Sbjct 48095 CTTTAATATATGTATCAATTAAAAGACTAT 48066 Score = 129 bits (142), Expect = 8e-25 Identities = 210/302 (70%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 50255 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 50314 |||| || ||||| |||||||| || || || || || || ||||||||||| || | || Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 50315 TCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 50374 | || || || | |||| || | |||||| || || || || ||| || | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 50375 CAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT---TATTCC 50431 |||| || || || |||| |||||||| |||||| | |||| || ||| Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACTACTCC 47813 Query 50432 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 |||| |||| |||| | | ||| | |||||| |||||||||| ||| ||||| | Sbjct 47812 AATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCTT 47753 Query 50492 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGAT 50551 |||||||||| ||||||| || | |||| ||||| || | |||||||||| | || Sbjct 47752 GTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATCTTTAT 47693 Query 50552 TT 50553 || Sbjct 47692 TT 47691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261626290360