Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq213 158 1e-33 >seq213 Length=53756 Score = 158 bits (174), Expect = 1e-33 Identities = 351/519 (68%), Gaps = 17/519 (3%) Strand=Plus/Minus Query 13604 TTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTAT 13663 ||| || ||||| ||||| | || || || || ||||||| ||||||| |||||| Sbjct 48625 TTCGAAAAAGTTTGTTTTTCTTTGGAGGGAAATCATTTCCATCCAATCAAAAGGATTTGA 48566 Query 13664 TGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAAT 13723 | || | | || | | |||| | | | | | | ||||||| ||| ||||| Sbjct 48565 AGCATTATAAATCTTTTTATAACCCAATGAGACCAAAAGACGATCAGCACAAAATTCAAT 48506 Query 13724 ATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAA 13783 |||||||||||| || || ||||||||| |||| | ||| || | | | | || Sbjct 48505 GTATTGAGACATTGAACGACTATTCATACCAATTAAATCTACTGGTAA-AGAGTCACAAA 48447 Query 13784 -AAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTC--ATTAGA 13840 |||||||||||| | || || ||| | ||||| | || | ||| ||| || Sbjct 48446 TAAATTCTTTTTCGCAAACAACGGCATCTCTAATAATGGCTTCAAGAGTCTTGGATTCGA 48387 Query 13841 AGGAGGATATT--TTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCA 13898 | |||| || | ||| ||||| ||| ||||||| |||||||| || ||| Sbjct 48386 GTTTGTTTATTAATTTGGTGTATAAAAG----ACATGCAAAATTGCAATGAAGACCTTCA 48331 Query 13899 TCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAAC 13958 || | | || | |||||||||||| ||||| |||||||| || |||| || |||||| Sbjct 48330 TCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCTCTCTTCTTTAAC 48271 Query 13959 C--AAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTA 14016 | |||||| | || || | | | |||| || || ||||| ||||| ||||| || | Sbjct 48270 CAGAAAATACTACAAAAACTACCACTGAAA--AAGATACCCTCTACTGCGGCAAATGCAA 48213 Query 14017 TTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtt 14076 || |||||| |||| || | | || || ||||||||| ||||| |||| || Sbjct 48212 CCAAACGTTCTGCAAAAGAATCACTATTATT---AATCCATTTTAATGCCCAATCAGCTT 48156 Query 14077 tttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14115 | ||||||||| | || || || || || ||||||| Sbjct 48155 TCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATA 48117 Score = 143 bits (158), Expect = 3e-29 Identities = 226/321 (70%), Gaps = 7/321 (2%) Strand=Plus/Minus Query 14170 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACC 14229 |||||||||| || ||||| || || || || ||||||||||| ||||||||||| | Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 14230 ATTGTACTTCCGAGTAA--AATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287 ||| || || | | | ||||| ||| | |||||| || || ||||||||| ||| Sbjct 47932 TTTGGACCTC--ACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGC 47875 Query 14288 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT--- 14344 ||||| ||||| || | || |||||| | | || | || ||||||||| | Sbjct 47874 GGCAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACTACT 47815 Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404 ||||||| | ||| | |||||| | ||| || ||||||||||||| || | || Sbjct 47814 CCAATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGC 47755 Query 14405 TTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCGAAGA 14464 || ||||||||| ||| || ||| ||| ||| ||||| | ||||||||| Sbjct 47754 TTGTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATCTTT 47695 Query 14465 TGTTTCTTTAAGAATTGGTTC 14485 ||||||| | ||||||||| Sbjct 47694 ATTTTCTTTTAAAATTGGTTC 47674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479723208716600