Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq246 122 7e-23 seq242 120 2e-22 seq7 105 5e-18 seq86 102 6e-17 >seq246 Length=49296 Score = 122 bits (134), Expect = 7e-23 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| |||||||| || ||||||| || || ||||| | |||||| ||||| Sbjct 11041 CCACCACGAAGTCTTAAAACTAAATGGAGGGTAGATTCTTTTTGAATATTGTAGTCGGAA 11100 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| |||||||| || | || |||||||| | || Sbjct 11101 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCTGGTGGG 11160 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| |||| || | ||| || || | | ||||| Sbjct 11161 ATACCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAACCTTCGACC 11220 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATT 43119 |||| || || ||||| || || || ||||| |||||||||||||| || | |||| Sbjct 11221 TCTAAGGTGATGGTTTTGCCAGTAAGGGTTTTTACAAAAATTTGCATGTTTTAAATT 11277 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| |||||||| || ||||| | ||| || ||||| | ||| || ||||| Sbjct 10813 CCACCACGAAGTCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAA 10872 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| ||||||||||| | || |||||||| | || Sbjct 10873 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 10932 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| |||| || | | | || || | | ||||| Sbjct 10933 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCGATGGTATCAGAACCTTCGACT 10992 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || ||||| || || |||| ||||| |||||||||||||| Sbjct 10993 TCTAAGGTGATAGTCTTACCAGTTAAGGTTTTTACAAAAATTTGCAT 11039 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 |||||| || ||||| | ||| || ||||| | |||||| ||||| | ||||| | Sbjct 10596 TCTTAATACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAGTCGGAAAGAGTACGACC 10655 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 || || |||||||| ||||||||||| | || |||||||| | || | ||||||||| Sbjct 10656 ATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTT 10715 Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073 || ||| |||| || | | | || || | | ||||| |||| || || Sbjct 10716 ATCTTGGATTTTGGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAAGTAAT 10775 Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||| || |||| ||||| |||||||||||||| Sbjct 10776 GGTTTTACCAGTTAAGGTTTTTACAAAAATTTGCAT 10811 >seq242 Length=49570 Score = 120 bits (132), Expect = 2e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| |||||||| || ||||||| ||| || ||||| | ||| || || || Sbjct 3835 CCACCACGAAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAG 3894 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| || |||||||| || || |||||||| | || Sbjct 3895 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGG 3954 Query 43003 ACACCTTCTTTTTCGCTGATCAAC-TCTTTGACTCTGCCAACTGTGTCGCCAGCCT-CGA 43060 | ||||||||| || ||| ||||| || | ||| ||| || ||||| | | Sbjct 3955 ATACCTTCTTTATCTTGAATCTTGGTCTTT-ACATTTTCAATTGTATCTG-AGCCTTCAA 4012 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| || |||||||| ||||||| |||||| || ||||||||||| Sbjct 4013 CTTCTAAAGTAATAGTTTTACCGGTTAAAGTTTTGACGAAAATTTGCAT 4061 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||||| ||| || ||||| | |||||||| || | ||||| | || || Sbjct 4081 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCT 4140 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| || |||||||| | || |||||||| | || | ||||||||| || | Sbjct 4141 AATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGG 4200 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCT-CGACGTCTACCGTTATAGTTTT 43079 || ||| || | ||| || || ||||| | || |||| || |||||||| Sbjct 4201 ATTTTAGTTTTAACATTTTCAATAGTATCTG-AGCCTTCAACTTCTAAGGTGATAGTTTT 4259 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || |||||||| |||||||||||||| Sbjct 4260 ACCAGTAAGAGTTTTAACAAAAATTTGCAT 4289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| |||||||| || ||||||| ||| || ||||| | ||||| || || Sbjct 4519 CCACCACGGAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAG 4578 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| || |||||||| | || |||||||| | || Sbjct 4579 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGA 4638 Query 43003 ACACCTTCTTTTTCGCTGATCAAC-TCTTTGACTCTGCCAACTGTGTCGCCAGCCT-CGA 43060 | |||||||| || ||| ||||| || | ||| || || ||||| | | Sbjct 4639 ATTCCTTCTTTATCTTGGATTTTGGTCTTT-ACATTTTCAATGGTATCAG-AGCCTTCTA 4696 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| || || || || || || |||||||| |||||||||||||| Sbjct 4697 CTTCTAAAGTAATGGTCTTGCCAGTAAGAGTTTTAACAAAAATTTGCAT 4745 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||||| ||| || ||||| | ||| || || || | ||||| | || || Sbjct 4309 ACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAAAGAGTACGACCATCTTCT 4368 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| || |||||||| | || |||||||| | || | ||||||||| || | Sbjct 4369 AATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTATCTTGG 4428 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCT-CGACGTCTACCGTTATAGTTTT 43079 || |||||| | ||| ||| || ||||| |||| || | || || ||||| Sbjct 4429 ATTTTGGTTTTGACGTTTTCAATTGTATCTG-AGCCTTCGACTTCGAGGGTAATGGTTTT 4487 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || ||||| |||||||||||||| Sbjct 4488 ACCAGTAAGGGTTTTAACAAAAATTTGCAT 4517 >seq7 Length=199231 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 |||||| || ||||||| ||| |||||||| | |||||| || || | |||||| | Sbjct 43529 TCTTAATACTAAATGGAGAGTAGATTCCTTTTGAATATTGTAGTCAGAGAGTGTACGGCC 43470 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 || || ||||| || ||||| ||||| || || |||||||| | || | ||||||||| Sbjct 43469 ATCTTCTAATTGCTTACCGGCGAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTT 43410 Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073 || ||| ||| || | ||| || || | | ||||| || | || || Sbjct 43409 ATCTTGAATCTTGGTTTTAACGTTTTCAATGGTATCTGAACCTTCGACTTCAAGAGTAAT 43350 Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||||| || |||| || || |||||||||||||| Sbjct 43349 AGTTTTACCAGTTAATGTCTTGACAAAAATTTGCAT 43314 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||||| ||| || ||||| | ||| ||||| || | ||||| |||| || Sbjct 43294 ACTAAATGGAGAGTAGATTCTTTTTGGATATTATAATCTGAGAGAGTACGACCGTCTTCT 43235 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| || |||||||| || || ||||| || | || | ||||||||| || Sbjct 43234 AATTGTTTACCTGCAAAAATTAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGA 43175 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCT-CGACGTCTACCGTTATAGTTTT 43079 ||| |||||| | | | || || ||||| | || || | || || ||||| Sbjct 43174 ATCTTGGTTTTGACGTTCTCGATGGTATCTG-AGCCTTCAACTTCAAGAGTAATGGTTTT 43116 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || |||| |||||| |||||||||||||| Sbjct 43115 ACCAGTTAAAGTTTTGACAAAAATTTGCAT 43086 Score = 84.2 bits (92), Expect = 2e-11 Identities = 165/243 (68%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| | || ||||||| || || ||||| | ||||| || || Sbjct 43084 CCACCTCTCAATCTGAGAACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAG 43025 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| || || ||||| || || ||||| || | || Sbjct 43024 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGG 42965 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| ||| || | ||| || || | | ||||| Sbjct 42964 ATACCTTCTTTATCTTGGATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACT 42905 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTTTA 43122 || | || || ||||| || |||| |||||| |||||||||||||| | | ||||| | Sbjct 42904 TCGAGGGTGATGGTTTTACCAGTTAAAGTTTTGACAAAAATTTGCATAT--TGAATTTAA 42847 Query 43123 TTT 43125 ||| Sbjct 42846 TTT 42844 >seq86 Length=87693 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| |||||||| || ||||||| ||| || ||||| | ||||| || || Sbjct 63294 CCACCACGGAGTCTTAAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAG 63235 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| ||||||||||| | || |||||||| | || Sbjct 63234 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 63175 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCC-TCGAC 43061 | ||||||||| || ||| |||||| | | | || || |||| ||||| Sbjct 63174 ATACCTTCTTTATCTTGAATCTTGGTTTTGACGTTTTCGATGGTATC-TGAGCCTTCGAC 63116 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || ||||| || || || ||||| || ||||||||||| Sbjct 63115 TTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACGAAAATTTGCAT 63068 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||||| ||| || ||||| | ||||||||| || | ||||| | || || Sbjct 63504 ACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCT 63445 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| || || ||||| | || ||||| || | || | ||||||||| || | Sbjct 63444 AATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTGG 63385 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 || ||| || | ||| || || | | ||||| || | || || ||||| Sbjct 63384 ATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACTTCGAGGGTGATGGTTTTA 63325 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || ||||| |||||||||||||| Sbjct 63324 CCAGTAAGGGTTTTGACAAAAATTTGCAT 63296 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||||| ||| || ||||| | || || || || | ||||| | || || Sbjct 63960 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGAAAGAGTACGACCATCTTCT 63901 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| ||||||||||| | || |||||||| | || | |||||| || || Sbjct 63900 AATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGA 63841 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCC-TCGACGTCTACCGTTATAGTTTT 43079 ||| |||||| | ||| || || |||| ||||| || | || || ||||| Sbjct 63840 ATCTTGGTTTTGACGTTTTCAATGGTATC-TGAGCCTTCGACTTCGAGGGTGATGGTTTT 63782 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || ||||| |||||||||||||| Sbjct 63781 ACCAGTAAGGGTTTTGACAAAAATTTGCAT 63752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381365886294342