Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq230 206 4e-48 seq213 176 6e-39 >seq230 Length=51241 Score = 206 bits (228), Expect = 4e-48 Identities = 1028/1624 (63%), Gaps = 58/1624 (4%) Strand=Plus/Plus Query 70831 GTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 70890 ||||| ||||||||||| || ||||| ||||| |||| ||| |||||||| Sbjct 28017 GTACGGAGATAGTACATACCAGTTTTGAGACCTTTTTTCCAAGAGTAGAAATGCATTGAT 28076 Query 70891 GTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATG 70950 || ||||| | | | | || || || || || ||| | ||||||||||| || Sbjct 28077 GTAAGTTTAGCAAAAGTTGGTTCAGCAATAAAAACATTGAAACTTTGACTTTGATCAATA 28136 Query 70951 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 71010 || || || | || |||||||| | || | || ||||| ||||||||||| ||| Sbjct 28137 AAAGCACCACGATCAGCAGCCATATCAATTAATGTTCTTTGTCTAATTTCCCAAACTGTT 28196 Query 71011 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCT 71067 || |||| | |||| ||| ||||||| | || || | ||||| || |||| | Sbjct 28197 TTGTAAAGTTCTTTAAGATCATCTGGAATGGATGGGATACTTTGAATTGAACCACGGTTG 28256 Query 71068 GCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 71127 || || ||| || | ||| ||| | | | ||| | | | || || Sbjct 28257 AGAACGATTTGATTCTTTAATTCTGGTGACCAAATTCCTAACTCCATGAGATCTTCGAGA 28316 Query 71128 AGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 71187 || || ||| || | |||||| |||| || || | |||| ||||||| |||||| Sbjct 28317 AGTTGTTTATTGACAATAGTAAATTCACCAGCTAAAACACGACGACTGTAAATGTTACTG 28376 Query 71188 GTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 71247 ||||| ||||| | | || || || || |||||||| | |||||||||||| ||||| Sbjct 28377 GTATATGGTTCAAAGCATTCGTTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGGCATT 28436 Query 71248 GGTGCCACCAATAGACTATTTCTAAGACCA----TGTGATCGGATTTTATCTTTTAGAGA 71303 ||||| | || || || | ||||||| | | | | ||||||||||| ||| Sbjct 28437 GGTGCTATTAAAAGTGAGTTACGAAGACCACCTTTATTAACA-ATTTTATCTTTGAGATC 28495 Query 71304 TTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTT 71363 ||| |||||| ||| | |||| ||| || || | Sbjct 28496 AGTCCAGTTCCAACGATTTGTTGGTGTAACATTCCAGAAATCGTATTGGAGAATACCTTG 28555 Query 71364 ACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACT 71423 || || ||| ||| | |||| || ||||| ||||| | | || || Sbjct 28556 GCTGGCTGGTGAACCTTTAAATGTTTCATATGGACCTTCAATAAGAGATAACTCGTGTGA 28615 Query 71424 CGCCTCTAATG-CTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 71482 || | ||| | | || ||||||| ||||| ||| | | || | || ||| | Sbjct 28616 TGC-TGTAAGGGCAGCAAAATAAATAGTTTCTGCAATTTCAATGTTTA-ATTTTGCGGCA 28673 Query 71483 CCGGG-CTATCAAATGG-ATAATTTAAGA-GAATAAACGCGTCTGCTAATCCTTGAACGC 71539 ||| | ||||||||| ||| ||| |||| || | || || | ||||||| | Sbjct 28674 GCGGTACCATCAAATGGCATACG--AAGTTGAATGAAAACATCAGCAAGACCTTGAATAC 28731 Query 71540 CAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAAT 71599 ||||||| || || | ||||| |||||| ||| |||||| ||| ||||| || | Sbjct 28732 CAATACCAATTGGACGATGTCTTAAATTAGAGGTTTTGGCTTCTTGAACTGGATAGTAGT 28791 Query 71600 TAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGA 71659 || ||| |||||||| || ||||| || | | ||| | || | ||||| Sbjct 28792 TACGATCAATAATTTTGTTAAGATTCTTGGTAACAATTTTAGTGATTTCATAAAGTTTTT 28851 Query 71660 GAAAATCAAATC-----TC----------------CCATCTATT--ACAAACACGTTC-- 71694 || ||||||| || || ||| || || || || Sbjct 28852 GATGATCAAATTCTTTTTCTTTTGGATTGGTTGAACCTTCTTTTCTACGAATGAATTTTG 28911 Query 71695 --AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAA 71752 ||||||| ||||| |||||||| || || | ||||| | | ||||| |||| Sbjct 28912 GTAAGGCAATGGATGCGAGATTACATACAGCAATCTCATCTGGGGATGTGTATTGAATAA 28971 Query 71753 TTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGT 71812 |||| || ||||||||||| | | || || || | ||| | |||||| || | Sbjct 28972 TTTCGGTACAAAGATTACTGCTGCTAATAGTACCAAGATTCTTTTGATTGGATTTAGAAT 29031 Query 71813 TACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 71872 |||| | ||| ||||| |||||||| || ||||||||||||| ||||| || || || | Sbjct 29032 TACAAGAATCTTTATAGAGAATAAATGGTGTACCAGTTTCAACTTGAGACTCCATGATTG 29091 Query 71873 CTTTCCAGACGACTCGAGCCTTTATTATA-TTCTTGTA---TCTCTTTTCTCTTTCGTAT 71928 | ||| | || |||| || |||| | ||| | | || | | | |||| ||| Sbjct 29092 CAAACCAAAGTTCTTGAGCTTTAATTACACGTCTAGCAAGGCCTGGTGTAT-TTTCATAT 29150 Query 71929 TGTGTATATAATCGTT--CGA-ACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCA 71985 | || | |||| ||| ||| || ||| || | ||| | | || ||| Sbjct 29151 T-TG-AGATAA-AGTTCACGATGTTCTTCTGAGTGAGTTTCGTCAAGACGTGGGGCTTCG 29207 Query 71986 TTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGA 72045 || ||||| | | |||||| ||||| | | | ||||| || ||| || ||||| Sbjct 29208 TTAGGACAAAAGAGTGACCAATCTCCGTTTTGTTCTACTCTTTCCATGAAAAGATCGCTG 29267 Query 72046 ATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTA 72105 | ||||||||| ||| |||||||||| ||| || || || || ||||||||| Sbjct 29268 ACCCAAAGAGCGTAAAAGAGATCTCTGGCTCTCATTTCTTCCTTACCATGATTCTTTTTG 29327 Query 72106 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCC 72165 || || | || | | |||||| || ||||| ||||| | |||| || | | || Sbjct 29328 AGTTCAATAAATTCAAAAATATCTGAGTGCCATGGTTCGAGATATACTGCAAAGGCACCT 29387 Query 72166 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 72225 | ||| || || ||||||| || | ||| || | ||| |||| | | |||| Sbjct 29388 TTTCTTTTACCACCACCTTGATCTACATAACGAGCAGTATCATTGAAAACACGGAGCATT 29447 Query 72226 GGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA 72285 || | | |||||| | |||||||| || ||||| ||| | ||||||||| Sbjct 29448 GGTACCAAACCATTACTGGTGCCATTGGTACCACGAATATAACTTTGAGCGGCACGAATC 29507 Query 72286 T--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 72343 | || || | | |||||| || ||||| ||| || ||||| || ||| |||| | Sbjct 29508 TTATGGCAA--GCAATACCTATACCACCTGCAGATTTTGAAATTAAAGCACATTGTTTGA 29565 Query 72344 ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA 72403 |||||||| || || || || ||| || |||| | || || ||| || |||| Sbjct 29566 GGGTATCATAAATACCATCGATTGAATCCTCTTTCATTTGAACTAAAAAGCATGAGGACA 29625 Query 72404 TTTG 72407 |||| Sbjct 29626 TTTG 29629 >seq213 Length=53756 Score = 176 bits (194), Expect = 6e-39 Identities = 388/570 (68%), Gaps = 20/570 (4%) Strand=Plus/Minus Query 41797 TTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGT 41856 ||||||||| || || |||| || | || || ||||||| ||||||| ||||| | Sbjct 48625 TTCGAAAAAGTTTGTTTTTCTTTGGAGGGAAATCATTTCCATCCAATCAAAAGGATTTGA 48566 Query 41857 AACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT---CTATCTGCGATGAATTC 41913 | |||||||||| |||||| | |||||| || | ||| | ||| || ||||| Sbjct 48565 AGCATTATAAATCTTTTTATAACCCAAT---GAGACCAAAAGACGATCAGCACAAAATTC 48509 Query 41914 TATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGG--AAGAGCCACA 41971 || ||| ||| || |||||| || || | | ||||| ||||| |||| Sbjct 48508 AATGTATTGAGACATTGAACGACTATTCATACCAATTAAATCTACTGGTAAAGAGTCACA 48449 Query 41972 GTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTC- 42030 || |||||||| ||| | || || ||| | ||||| | ||| | |||| Sbjct 48448 --AATAAATTCTTTTTCGCAAACAACGGCATCTCTAATAATGG--CTTCAAGAGTCTTGG 48393 Query 42031 ACTCG-GTGGATACAATAAAT--GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACC 42087 | ||| || | | ||| | || || | | | |||||| |||| ||| || ||||| Sbjct 48392 ATTCGAGTTTGTTTATTAATTTGGTGTATAAA--AGACATGCAAAATTGCAATGAAGACC 48335 Query 42088 CTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 42147 ||||| | | ||||||||||| ||||| || | || ||||||| || | ||| || Sbjct 48334 TTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCTCTCTTCTT 48275 Query 42148 AAGCCAAAATATA-GACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||| || ||| || ||| | ||| || ||||| || |||||||| ||||| | Sbjct 48274 TAACCAGAAAATACTACAAAAACTA-CCACTGAAAAAGATACCCTCTACTGCGGCAAATG 48216 Query 42207 CAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 42266 ||| | | ||| || || |||| | || ||||| ||| |||||||| || | Sbjct 48215 CAACCAAACGTTCTGCAAAAGAATCACTATTATTAATCCATTTTAATGCCCAATCAGCTT 48156 Query 42267 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 42326 ||||||| | ||| || || || ||||| || ||||| || | |||||| | | ||| Sbjct 48155 TCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTACTTTTTTGCTCATTAT 48096 Query 42327 CTTTAACATATGTATCGATCAAAAGACTAT 42356 |||||| ||||||||| || |||||||||| Sbjct 48095 CTTTAATATATGTATCAATTAAAAGACTAT 48066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132496997240