Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq242 84.2 2e-11 >seq242 Length=49570 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || || || |||||||| ||||| || | | || | || || | |||||||| Sbjct 3637 GTTGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTCTAATTGTTTACCT 3696 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| |||||||||| || ||||| || | || |||||||| |||||| ||| Sbjct 3697 GCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTTAGTTTTA 3756 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGT-TTCGACGGTAATGGTTTTACCTGTTAAAGT 19023 || | | | |||||| || || | ||| | |||||||||||||| |||||||| Sbjct 3757 ACGTTTTCAATAGTATCTG-AGCCTTCAACTTCTAAAGTAATGGTTTTACCGGTTAAAGT 3815 Query 19024 TTTGACAAAAATTTGCAT 19041 ||| || ||||||||||| Sbjct 3816 TTTAACGAAAATTTGCAT 3833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414568762967806