Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 2e-15 seq242 95.1 8e-15 >seq7 Length=199231 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | | || ||||| | || || |||||||| ||||| ||||| || Sbjct 43313 ACCACCTCTTAATCTAAGTACTAAATGGAGAGTAGATTCTTTTTGGATATTATAATCTGA 43254 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | ||| || ||||| || || ||| ||||||||||| ||||| | || Sbjct 43253 GAGAGTACGACCGTCTTCTAATTGTTTACCTGCAAAAATTAAACGTTGTTGGTCTGGTGG 43194 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || |||| ||| || | | || || || | || ||| Sbjct 43193 GATACCTTCTTTATCTTGAATCTTGGTTTTGACGTTCTCGATGGTATCTGAGCCTTCAAC 43134 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || ||||| || || | |||||| || ||||||||||| Sbjct 43133 TTCAAGAGTAATGGTTTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 43086 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | | || ||||| | || || |||||||| |||||||| || || Sbjct 43769 ACCACCTCTTAATCTGAGAACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAGTCTGA 43710 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | || || ||||| || || ||| || | |||||| || || | || Sbjct 43709 GAGGGTACGACCATCTTCTAATTGTTTGCCTGCAAAGATAAGACGTTGTTGATCTGGTGG 43650 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || |||| ||| || ||| || || || | || ||| Sbjct 43649 GATACCTTCTTTATCTTGAATCTTGGTTTTAACGTTTTCGATGGTATCTGAGCCTTCAAC 43590 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || | || || ||||| || |||||||| |||||||||||||||||| Sbjct 43589 TTCTAATGTAATAGTTTTACCGGTAAGAGTCTTTACGAAAATTTGCATG 43541 >seq242 Length=49570 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 33158 AACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCA 33217 || || ||||| | || || |||||||| ||||| || ||||| | | | | || Sbjct 3850 AATACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAGAGAGTACGACCATCT 3909 Query 33218 TCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCG 33277 || ||||| || ||| ||| ||||||||||| || || | || || |||||||| || Sbjct 3910 TCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 3969 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 |||| ||||| ||| ||| || || | || ||| || | ||| || ||| Sbjct 3970 TGAATCTTGGTCTTTACATTTTCAATTGTATCTGAGCCTTCAACTTCTAAAGTAATAGTT 4029 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || | |||||| |||||||||||||| Sbjct 4030 TTACCGGTTAAAGTTTTGACGAAAATTTGCAT 4061 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | | || ||||| | || || |||||||| || ||||||||||| Sbjct 4062 ACCACCTCTTAATCTAAGGACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGA 4121 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || || ||||| ||||| ||| || | |||||| || || | || Sbjct 4122 AAGAGTACGACCATCTTCTAATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGG 4181 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || || ||| || ||| ||| || || | || ||| Sbjct 4182 GATACCTTCTTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCTGAGCCTTCAAC 4241 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | || || ||||| || ||||||||||| || ||||||||||| Sbjct 4242 TTCTAAGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCAT 4289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318774495803502