Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq242 118 9e-22 seq246 111 1e-19 seq86 98.7 8e-16 seq7 95.1 1e-14 >seq242 Length=49570 Score = 118 bits (130), Expect = 9e-22 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||||||||| |||||||| || Sbjct 3607 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAA 3666 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| ||||||| || |||||||| || Sbjct 3667 AGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGG 3726 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATC---GCCAGGTTCC 20158 | ||||||||||| |||||| ||| || | ||| || ||| ||| ||| Sbjct 3727 ATACCTTCTTTGTCTTGAATTTTAGTTTTAACGTTTTCAATAGTATCTGAGCC---TTCA 3783 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | ||||||||||| ||||| || ||||| || ||||||||||| Sbjct 3784 ACTTCTAAAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 3833 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||||||||| ||||||||||| Sbjct 4063 CCACCTCTTAATCTAAGGACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAA 4122 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| |||| || | |||||||| || Sbjct 4123 AGAGTACGACCATCTTCTAATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGGG 4182 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATC---GCCAGGTTCC 20158 | |||||||| || ||||| ||| || | ||| || ||| ||| ||| Sbjct 4183 ATACCTTCTTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCTGAGCC---TTCA 4239 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | ||| || ||||| || || | ||||| |||||||||||||| Sbjct 4240 ACTTCTAAGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCAT 4289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||||||||| || || || || Sbjct 4291 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAA 4350 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| ||||||| || |||||||| || Sbjct 4351 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGG 4410 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATC---GCCAGGTTCC 20158 | |||||||| || ||||| ||| || | ||| | ||| ||| ||| Sbjct 4411 ATACCTTCTTTATCTTGGATTTTGGTTTTGACGTTTTCAATTGTATCTGAGCC---TTCG 4467 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | |||||||||||| || || | ||||| |||||||||||||| Sbjct 4468 ACTTCGAGGGTAATGGTTTTACCAGTAAGGGTTTTAACAAAAATTTGCAT 4517 >seq246 Length=49296 Score = 111 bits (122), Expect = 1e-19 Identities = 159/223 (71%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 || || || ||||| || |||||||||||||| || ||||| ||| | ||| | | Sbjct 11053 CTTAAAACTAAATGGAGGGTAGATTCTTTTTGAATATTGTAGTCGGAAAGAGTACGACCA 11112 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||| |||||||| || ||| | ||||| || |||||||| || | |||||||| Sbjct 11113 TCTTCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTA 11172 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || ||||| ||| || | ||| || ||| | ||| || | ||| ||| Sbjct 11173 TCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAACCTTCGACCTCTAAGGTGATG 11232 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT-TTTTAAA 20215 |||||||| || | ||||| |||||||||||||| ||||||| Sbjct 11233 GTTTTGCCAGTAAGGGTTTTTACAAAAATTTGCATGTTTTAAA 11275 Score = 104 bits (114), Expect = 2e-17 Identities = 171/247 (69%), Gaps = 5/247 (2%) Strand=Plus/Plus Query 19967 ATATTTTATCATTTT-----CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTT 20021 ||||||||| | ||| || |||| ||| || || || ||||| || || ||||||| Sbjct 10565 ATATTTTATTAATTTAGAGACCACCTCTTAATCTTAATACTAAATGAAGAGTTGATTCTT 10624 Query 20022 TTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAA 20081 |||| || ||||| ||| | ||| | |||||| |||||||| || ||| |||| | Sbjct 10625 TTTGAATATTGTAGTCGGAAAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGA 10684 Query 20082 GCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAA 20141 | | |||||||| || | |||||||| || ||||| ||| || | | | Sbjct 10685 GACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGGATTTTGGCTTTTACATTTTCGA 10744 Query 20142 CAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAA 20201 | ||| | ||| ||| | ||||||||||| || || || ||||| ||||||| Sbjct 10745 TGGTATCAGAACCTTCGACTTCTAAAGTAATGGTTTTACCAGTTAAGGTTTTTACAAAAA 10804 Query 20202 TTTGCAT 20208 ||||||| Sbjct 10805 TTTGCAT 10811 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 || || || ||||| || || ||||||||||| || || || ||| | ||| | | Sbjct 10825 CTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAAAGAGTACGACCA 10884 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||| |||||||| || ||| |||| || | |||||||| || | ||||||||| Sbjct 10885 TCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTG 10944 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || ||||| ||| || | | | | ||| | ||| ||| | ||| || Sbjct 10945 TCTTGGATTTTAGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAGGTGATA 11004 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || ||||| |||||||||||||| Sbjct 11005 GTCTTACCAGTTAAGGTTTTTACAAAAATTTGCAT 11039 >seq86 Length=87693 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||||||||| || |||||||| Sbjct 63522 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAA 63463 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || ||||||| | ||||| || || Sbjct 63462 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGG 63403 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||| ||| || | ||| | ||| | ||| | Sbjct 63402 ATACCTTCTTTGTCTTGGATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACT 63343 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| |||||||| || || | |||||||||||||||||||| Sbjct 63342 TCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCAT 63296 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||||||||| ||||| || || Sbjct 63978 CCACCTCTTAATCTGAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGAA 63919 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| |||| || | |||||||| || Sbjct 63918 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 63859 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATC---GCCAGGTTCC 20158 | ||||| ||||| ||| || ||| || | ||| | ||| ||| ||| Sbjct 63858 ATACCTTCCTTGTCTTGAATCTTGGTTTTGACGTTTTCAATGGTATCTGAGCC---TTCG 63802 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | ||| |||||||| || || | |||||||||||||||||||| Sbjct 63801 ACTTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCAT 63752 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 || || || ||||| || || ||||||||||| |||||||| || | ||| | | Sbjct 63282 CTTAAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTACGACCA 63223 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||| |||||||| || ||| |||| || | |||||||| || | |||||||| Sbjct 63222 TCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTA 63163 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATC---GCCAGGTTCCGTTTCCACGGTA 20170 || ||| || ||| || | | | | ||| ||| ||| ||| | ||| Sbjct 63162 TCTTGAATCTTGGTTTTGACGTTTTCGATGGTATCTGAGCC---TTCGACTTCGAGGGTG 63106 Query 20171 ATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||||||| || || | |||||||| ||||||||||| Sbjct 63105 ATGGTTTTACCAGTAAGGGTTTTGACGAAAATTTGCAT 63068 Score = 82.4 bits (90), Expect = 6e-11 Identities = 161/237 (68%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||||||||| || || || || Sbjct 63066 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTATAGTCAGAA 63007 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| |||| || | ||||| || || Sbjct 63006 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGG 62947 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATC---GCCAGGTTCC 20158 | ||||||||||| ||||| ||| || | ||| | ||| ||| ||| Sbjct 62946 ATACCTTCTTTGTCTTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAGCC---TTCT 62890 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAA 20215 || | ||||||||| || || || | ||||| |||||||||||||| ||||| Sbjct 62889 ACCTCAAGGGTAATGGTCTTACCAGTAAGTGTTTTAACAAAAATTTGCATAATTAAA 62833 >seq7 Length=199231 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19979 TTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 ||||| |||| || || | || ||||| || |||||||||||||| |||||||| || Sbjct 43999 TTTCCACCTCTCAATCTGAGGACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCA 43940 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | ||| | |||||| |||||||| || || |||| | | ||||| || Sbjct 43939 GAGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGT 43880 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | |||||||| || ||||| ||| || | ||| | ||| | ||| Sbjct 43879 GGAATACCTTCTTTATCTTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAACCTTCG 43820 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | ||| |||||||| || || || |||||||||||||||||||| Sbjct 43819 ACTTCGAGGGTGATGGTTTTACCAGTTAATGTTTTGACAAAAATTTGCAT 43770 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || || | || ||||| || |||||||||||||| |||||||| || Sbjct 43084 CCACCTCTCAATCTGAGAACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAG 43025 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || |||| | | ||||| || || Sbjct 43024 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGG 42965 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||||| ||| || | ||| | ||| | ||| | Sbjct 42964 ATACCTTCTTTATCTTGGATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACT 42905 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAA 20214 || | ||| |||||||| || || || |||||||||||||||||||| || || Sbjct 42904 TCGAGGGTGATGGTTTTACCAGTTAAAGTTTTGACAAAAATTTGCATATTGAA 42852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419583114138519