Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq213 125 6e-24 >seq213 Length=53756 Score = 125 bits (138), Expect = 6e-24 Identities = 391/598 (65%), Gaps = 18/598 (3%) Strand=Plus/Minus Query 12856 CATTTTTTG-ATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAA 12914 || |||| | ||||||| ||| | ||| |||||||||||||||| || | |||| Sbjct 48653 CAGTTTTAGCATATTCGGCTACTTTACCTTCGAAAAAGTTTGTTTTTCTTTGGAGGGAAA 48594 Query 12915 TATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTA 12974 | ||||||| |||| ||||||||| | | ||| |||||| | || ||| | Sbjct 48593 TCATTTCCATCCAATCAAAAGGATTTGAAGCATTATAAATCTTTTTATAACCCAATGAGA 48534 Query 12975 GTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034 || | | |||||| ||| || ||||| || |||| || || ||||| || | Sbjct 48533 CCAAAAGACGATCAGCACAAAATTCAATGTATTGAGACATTGAACGACTATTCATACCAA 48474 Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAA 13094 |||| | ||| || | || || | ||| | |||||| | |||| || || ||| Sbjct 48473 TTAAATCTACTGGTAAAGAGTCACAAATAAATTCTTTTTCGCAAACAACGGCATCTCTAA 48414 Query 13095 CTATGTCTCTTATTACGTTCTCTAATGGAGGAT-TTGATAGAT---GCTTAAACATCATA 13150 ||| || | | | || | | | ||| | || || || | || | | | | Sbjct 48413 TAATGGCT-TCAAGA-GTCTTGGATTCGAGTTTGTTTATTAATTTGGTGTATAAA--AGA 48358 Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 |||||||||| || || | |||||||| | | |||| ||||||||||| |||| | Sbjct 48357 CATGCAAAATTGCAATGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAA 48298 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| | |||| || || | ||| || ||| | ||| ||| ||||| Sbjct 48297 CCTGGCATTAAACCTCTCTTCTTTAACCAGAAAATACTACAAAAACTACCACTGAAAAAG 48238 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG---TACTATTTTTACTC 13327 || || || ||||| ||||| || | ||| | ||| || | | |||||| ||| Sbjct 48237 ATACCCTCTACTGCGGCAAATGCAACCAAACGTTCTGCAAAAGAATCACTATTATTA--- 48181 Query 13328 TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCG 13387 ||||| ||| ||||| | ||||| | ||||| || || | ||||||||| Sbjct 48180 ---ATCCATTTTAATGCCCAATCAGCTTTCTTTTTAATACATGGAATGGTATCTATTGCG 48124 Query 13388 TTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTAT 13445 ||||||| | | |||||| || | | ||| |||||| ||||| || || | |||| Sbjct 48123 TTAAATAGTTTACTTTTTTGCTCATTATCTTTAATATATGTATCAATTAAAAGACTAT 48066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430978203174198