Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq45 132 6e-26 seq64 100 3e-16 >seq45 Length=117154 Score = 132 bits (146), Expect = 6e-26 Identities = 255/375 (68%), Gaps = 32/375 (9%) Strand=Plus/Plus Query 164722 TTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGTGATAATATT 164781 |||||| ||||| |||| ||||| | ||||| |||||||| || | ||| | | | Sbjct 17082 TTACATATTATTATTTTCGATGAATTGGATGCAATTTGCAAACAAAGAGGTTCAAGAAGT 17141 Query 164782 ----ATTCA--------TGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTA 164829 | ||| |||| |||| |||||||| ||| | | | || ||||||||| Sbjct 17142 GGCGACTCAGGTGTAGGTGATTCAGTAGTTAATCAATTGTTAACAATGATTGATGGTGTA 17201 Query 164830 GAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGAT 164889 ||||| ||||||||||||||| || | |||||||||||| || ||| | |||||||| Sbjct 17202 GAATCATTAAATAATATTTTAGTTATTGGTATGACCAACAGAAAGGATATGATTGATGAA 17261 Query 164890 GCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAA 164949 || ||| | || || ||| |||||||| | | | ||||| |||||| || || | Sbjct 17262 GCCTTACTTCGTCCAGGTAGATTAGAAGTTCATGTTGAAATTTCATTACCAGATGAACAT 17321 Query 164950 GGACGCCTTCAAATTTTAAAAGTTCATGTGGCTAAAATGAAATCCTGTGATATATTAT-C 165008 ||| | |||||||| || |||| || ||||||| | || | | || | Sbjct 17322 GGAAGAGAACAAATTTTCAAGATTCACACAGCCAAAATGA------GAGA-ACAAAATGC 17374 Query 165009 TCCCGATGTAGATTTAAATAAAATAGCTGCC---------GAAACTAAAAATTATAGTGG 165059 || |||| |||| | ||| |||||||| || || | |||||||||||| Sbjct 17375 TCTCGATTCAGATGTCAAT---TTAGCTGCCTATGCTCATGACACAAGAAATTATAGTGG 17431 Query 165060 TGCTGAATTAGAGGG 165074 ||||||| | || || Sbjct 17432 TGCTGAAATTGAAGG 17446 Score = 96.9 bits (106), Expect = 4e-15 Identities = 215/309 (70%), Gaps = 14/309 (5%) Strand=Plus/Plus Query 164379 AAATGTTCA-ATTAAATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAAT 164437 |||| |||| || ||||| | |||||| | ||||| | ||||| ||||| ||||| Sbjct 16647 AAATTTTCACATCTGATTGGGACTTTGAAAATATGGGTATTGGTGGTTTAGATGAAGAAT 16706 Query 164438 TTTCTCTTATTTTCAGACGAGCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaa 164496 || |||||| ||||| || ||| | || | | |||| | | | || | ||| Sbjct 16707 TTAGAGATATTTTTAGACGTGCTTTTTCATCACG-TATTTTCCCACCAGCTATTGTTAAA 16765 Query 164497 aaaTTAGGCTGTAAA-CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAA 164555 |||||||| ||| || || ||||||| || ||||||||||| || || ||| ||||| Sbjct 16766 AAATTAGG-TGTCAATCACGTAAAAGGTATGTTATTACATGGTCCACCAGGTACTGGTAA 16824 Query 164556 AACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGT 164612 ||| ||||| ||||| |||| | || | ||||| | | || || ||| |||| Sbjct 16825 AACTTTAATTGCTCGTCAAATTGGT-AAAATGTTAAATGGTAGAGAGCC--AAAAGTTGT 16881 Query 164613 TAATGGTCC-TGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGT 164671 | ||||| | ||| || || |||||||| ||| | || |||| || ||||||| | Sbjct 16882 TTCAGGTCCATCCATT-TTAAATAAATATGTTGGTCAATCTGAAGAAAACATTAGAAACT 16940 Query 164672 TGTTTCAGG 164680 | |||||| Sbjct 16941 T-ATTCAGG 16948 >seq64 Length=103366 Score = 100 bits (110), Expect = 3e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 19356 TACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGA 19415 |||| |||| |||||||| || |||| | || ||||||||| || ||||||||| Sbjct 81434 TACCACAAATTGGTGATAAATTCTCTTCACGTCATGGTCAAAAAGGTACTTGTGGTATGG 81493 Query 19416 TTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTA 19475 |||||||||||||||| | || | ||| ||| ||||| || || ||| || || | | Sbjct 81494 CTTATCGTCAAGAAGATTTACCATGGACTGTAGAAGGTATTGTTCCAGATATTGTTGTAA 81553 Query 19476 ACCCACATGCTTTTCCAAGTCGAATGAC 19503 | ||||| ||| ||||| ||| ||||| Sbjct 81554 ATCCACACGCTATTCCATCTCGTATGAC 81581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595866048728400