Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq8 250 4e-61 seq103 116 6e-21 >seq8 Length=179212 Score = 250 bits (276), Expect = 4e-61 Identities = 398/563 (71%), Gaps = 10/563 (2%) Strand=Plus/Plus Query 193634 AGTTGAACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGA 193693 |||| | || | || || |||||| | ||||| ||||||||||| ||||| || ||||| Sbjct 147438 AGTTAACCCAACAGAAATTTATAATTTAGGTGCACAAAGTCATGTCAAAGTATCATTTGA 147497 Query 193694 GATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGT 193753 ||| |||| ||||| ||||||||||| | | || | ||| | || | || ||| | Sbjct 147498 TATGTCAGAATATACAGGTAATGTTGATGGTCTTGGCGCACTTCGTATTTTAGATGCAAT 147557 Query 193754 TCGTATGTTGGGAATGGAGAAAG--ATGTTCGCATCTATCAGGCATCTACCAGCGAACTG 193811 ||||| |||| | | |||| | | ||| | ||||||| || || || ||||| Sbjct 147558 TCGTA-GTTGTG-GTTTAGAAGGCAAGGTTAGATTCTATCAAGCCTCCACATCAGAACTT 147615 Query 193812 TATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCT 193871 |||||| || | || | |||| ||||||||| ||||||||| ||||||| ||||| Sbjct 147616 TATGGTAAAGTCCAAGAGATCCCACAATCAGAAACAACACCATTTTATCCACGTTCTCCA 147675 Query 193872 TATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGA 193931 |||| || || || || | |||||||| | || |||||||| | ||| Sbjct 147676 TATGCAGTTGCTAAACAATACGCCTATTGGATTGTTGTAAACTATCGTGAAGCTTATAAT 147735 Query 193932 TTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTT 193991 | | || | |||||||||||| |||||||| || ||| | |||||| || ||| Sbjct 147736 ATGTATGCATGCAATGGTATTCTCTTTAATCACGAGTCACCACGTAGAGGTCCAACCTTT 147795 Query 193992 GTAACTCGTAAGATTACACAAGGTT--TATCTAAGATCTCTGTTGG-ATTACAGAAGATT 194048 |||||| | ||||| ||| | || | | || | |||| | | |||| ||| Sbjct 147796 GTAACTAGAAAGAT--CACTCGTTTCGTTGCCGGTATTGCACTTGGAAAGAAAGAA-ATT 147852 Query 194049 CTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAA 194108 ||||| ||||||||| |||| ||||| | |||||||| ||||| || |||||||| ||| Sbjct 147853 CTTTACCTTGGTAATATTAACGCTAAACGTGATTGGGGTCACGCCAAAGATTATGTCGAA 147912 Query 194109 GCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 || |||||||| ||||| ||||| ||| | || | |||| ||| ||||| || |||||| Sbjct 147913 GCCATGTGGTTGATGTTACAACAAGATAAGCCACAAGATTTTGTTATTGCAACCGGTGAA 147972 Query 194169 CAGTATTCTGTTAGAGACTTTGT 194191 |||| || | || ||||| Sbjct 147973 ACCCATTCAGTCCGTGAATTTGT 147995 >seq103 Length=80154 Score = 116 bits (128), Expect = 6e-21 Identities = 273/403 (68%), Gaps = 18/403 (4%) Strand=Plus/Minus Query 156640 TAAACAATTATGGCTAATTACGCATTATTAAGTGTATCCAATAAAACTGGTATTGTAGAT 156699 ||||||||| | || | |||||||||||||| | ||||||||||||||||| || Sbjct 4681 TAAACAATTTAGATTATGCAAGCATTATTAAGTGTTTATAATAAAACTGGTATTGTTGAA 4622 Query 156700 TTTGCAAGATCTCTAGTTGATTAT--GGATATACTATCATTTCTAGTGGTGGAACACATT 156757 ||| ||| | ||| || || | || | || | | ||||||| || || ||| || Sbjct 4621 TTTTCAAAAATTCT--TTCATCAAAGGGTTTTAATTTAATTTCTACAGGCGGTACA--TT 4566 Query 156758 CTGT--AATAGCAGCAGAAGGAATACCTGT--AACTAAGGTTTCTGATTATACTGGATCA 156813 | | |||| | | ||| || || ||| | ||||| ||| ||| | | Sbjct 4565 CAAATCATTAGCTGATAATGGATTAAAAGTTCAACAA--GTTTCAGATGTTACAGAGTAT 4508 Query 156814 CCAGAGATTCTTAATGGAAGAGTGAAGACATTACATCCAAAGATTCATGGTGGTATTCTT 156873 ||||| || | |||| ||||| || |||||||||||||||||||| |||| | | | Sbjct 4507 CCAGAAATGTTAGATGGTAGAGTTAAAACATTACATCCAAAGATTCACGGTGCTTTATTG 4448 Query 156874 GCACAGCGTGGTAATCCTGTACATGAT-ATGGATCGTAATGCAAATG--ATATTGGATTG 156930 || | | | | | | ||| || | | | | | ||||| |||| | Sbjct 4447 GCTCGTCCAG---AACTTTCACACCATCAAGCAGATTTAACCAAATATAATATCAAACCA 4391 Query 156931 ATTGATATTGTTGCAGTAAACTTATATCCTTTCGCAGAAACAGTTGCTAAACCAGATGTA 156990 ||| | ||||| | ||||| ||||| || || | |||||| || | ||||||||||| Sbjct 4390 ATTAAAATTGTAGTTGTAAATTTATACCCATTTGTAGAAACCATTTCAAAACCAGATGTT 4331 Query 156991 ACTCTTGCAGATGCAATAGAGAATATTGATATTGGTGGTCCTA 157033 ||||||| ||||||||| || || || ||||||||||||| || Sbjct 4330 ACTCTTGAAGATGCAATTGAAAACATCGATATTGGTGGTCATA 4288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807547134542440