Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq230 241 2e-58 seq213 114 2e-20 >seq230 Length=51241 Score = 241 bits (266), Expect = 2e-58 Identities = 1193/1884 (63%), Gaps = 54/1884 (3%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| | | | | || || ||||| ||||||||||| || ||||| ||| Sbjct 27987 GTGAATTGAATAGCATCAGCAGCTGGACGAGTACGGAGATAGTACATACCAGTTTTGAGA 28046 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||| ||| |||||||| || ||||| | | || | || || || ||| Sbjct 28047 CCTTTTTTCCAAGAGTAGAAATGCATTGATGTAAGTTTAGCAAAAGTTGGTTCAGCAATA 28106 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 | ||| | | |||||||||||| || || || || | || |||||||| | || Sbjct 28107 AAAACATTGAAACTTTGACTTTGATCAATAAAAGCACCACGATCAGCAGCCATATCAATT 28166 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 | || ||||| ||||||||||| ||||| |||| | |||| ||| ||||||| | Sbjct 28167 AATGTTCTTTGTCTAATTTCCCAAACTGTTTTGTAAAGTTCTTTAAGATCATCTGGAATG 28226 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA--TCTCATCAT 62289 || || | ||||| || |||| | | || |||||| | ||| | | Sbjct 28227 GATGGGATACTTTGAATTGAACCACGGTTGAGAACGATTTGATTCTTTAATTCTGGTGA- 28285 Query 62290 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62349 ||| | | | ||| | | | || || || || ||| || | |||||| | Sbjct 28286 -CCAAATTCCTAACTCCATGAGATCTTCGAGAAGTTGTTTATTGACAATAGTAAATTCAC 28344 Query 62350 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62409 ||| || || | ||| ||||||| ||||||||||| ||||| | | || || || | Sbjct 28345 CAGCTAAAACACGACGACTGTAAATGTTACTGGTATATGGTTCAAAGCATTCGTTGTTAC 28404 Query 62410 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62469 | |||||||| | |||||||||||| ||||| ||||| | || | || | ||||| Sbjct 28405 CTAAAATTTGTGAAGTTGATGCAGTTGGCATTGGTGCTATTAAAAGTGAGTTACGAAGAC 28464 Query 62470 CGTATGTTCTGA---TTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62526 | | | | | |||||||||| ||| ||| |||||| ||| | ||| || Sbjct 28465 CACCTTTATTAACAATTTTATCTTTGAGATCAGTCCAGTTCCAACGATTTGTTGGTGTAA 28524 Query 62527 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 62586 | ||| |||||||| | ||||| || ||| | |||| || | Sbjct 28525 CATTCCAGAAATCGTATTGGAGAATACCTTGGCTGGCTGGTGAACCTTTAAATGTTTCAT 28584 Query 62587 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATG-CACCGTAATAAATGGTT 62645 |||| ||||| | || || || || | ||| | || | ||||||| ||| Sbjct 28585 ATGGACCTTCAATAAGAGATAACTCGTGTGATGC-TGTAAGGGCAGCAAAATAAATAGTT 28643 Query 62646 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGG-CTATCAAATGG-ATAATTTAAGA 62703 || || | | |||| || ||| | | | | ||||||||| ||| ||| Sbjct 28644 TCTGCAATTTCAATGTTTA-ATTTTGCGGCAGCGGTACCATCAAATGGCATACG--AAGT 28700 Query 62704 -GAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762 |||| || | || || | ||||||| ||||||||| || || | |||||| |||| Sbjct 28701 TGAATGAAAACATCAGCAAGACCTTGAATACCAATACCAATTGGACGATGTCTTAAATTA 28760 Query 62763 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62822 ||| ||| |||||| ||| ||||| || ||| ||| |||||||| || ||||| || Sbjct 28761 GAGGTTTTGGCTTCTTGAACTGGATAGTAGTTACGATCAATAATTTTGTTAAGATTCTTG 28820 Query 62823 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC--------------- 62867 || | ||| | || | ||||| || ||||||| Sbjct 28821 GTAACAATTTTAGTGATTTCATAAAGTTTTTGATGATCAAATTCTTTTTCTTTTGGATTG 28880 Query 62868 ------CCATCTATT--ACAAAC--ATGTTC--AAGGCAACAGATGCCAGATTACAAACG 62915 || ||| || || || || || ||||||| ||||| |||||||| || Sbjct 28881 GTTGAACCTTCTTTTCTACGAATGAATTTTGGTAAGGCAATGGATGCGAGATTACATACA 28940 Query 62916 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATA 62975 || | ||||| | | ||||| || || || || ||||||||||| | | ||| Sbjct 28941 GCAATCTCATCTGGGGATGTGTATTGAATAATTTCGGTACAAAGATTACTGCTGCTAATA 29000 Query 62976 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGA 63035 || || | ||| | |||||| || ||||| | ||| ||||| ||||| ||||| Sbjct 29001 GTACCAAGATTCTTTTGATTGGATTTAGAATTACAAGAATCTTTATAGAGAATAAATGGT 29060 Query 63036 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA 63095 ||||||||||||| ||||| || || || || ||| | || |||| || |||| | Sbjct 29061 GTACCAGTTTCAACTTGAGACTCCATGATTGCAAACCAAAGTTCTTGAGCTTTAATTACA 29120 Query 63096 GATTT-GTATCTCCTT-TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCC 63153 | | | | ||| | | ||| ||| | | | || |||| | ||| | Sbjct 29121 CGTCTAGCAAGGCCTGGTGTATTTTC-ATATTTGAGATAAA-GTTCACGATGTTCTTCTG 29178 Query 63154 AAACATTGTC--CAATCCA-GGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63210 | | | || ||| | || ||| | ||||| | | ||||| ||||||| | Sbjct 29179 AGTGAGTTTCGTCAAGACGTGGGGCTTCGTTAGGACAAAAGAGTGACCAATCTCCGTTTT 29238 Query 63211 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 63270 | |||| || ||| || ||||| | ||||||||| ||| |||||||||| || Sbjct 29239 GTTCTACTCTTTCCATGAAAAGATCGCTGACCCAAAGAGCGTAAAAGAGATCTCTGGCTC 29298 Query 63271 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63330 | ||| || || || ||||||||| || || | || | | |||||| || |||| Sbjct 29299 TCATTTCTTCCTTACCATGATTCTTTTTGAGTTCAATAAATTCAAAAATATCTGAGTGCC 29358 Query 63331 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63390 | ||||| | |||| || | | || | ||| || || ||||||| || | Sbjct 29359 ATGGTTCGAGATATACTGCAAAGGCACCTTTTCTTTTACCACCACCTTGATCTACATAAC 29418 Query 63391 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTAC 63450 ||| || | ||| |||| | | |||||| | | ||| || | |||||||||| Sbjct 29419 GAGCAGTATCATTGAAAACACGGAGCATTGGTACCAAACCATTACTGGTGCCATTGGTAC 29478 Query 63451 CGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCA 63510 | ||||| ||| | ||||||||| ||| | | |||||| || ||||| Sbjct 29479 CACGAATATAACTTTGAGCGGCACGAATCTTATGGCAAGCAATACCTATACCACCTGCAG 29538 Query 63511 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGA 63570 ||| || ||||| || ||| |||| | || ||||| ||||| || || ||| || Sbjct 29539 ATTTTGAAATTAAAGCACATTGTTTGAGGGTATCATAAATACCATCGATTGAATCCTCTT 29598 Query 63571 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 63630 |||| | || || ||| || |||||||| | || || ||||| || | | Sbjct 29599 TCATTTGAACTAAAAAGCATGAGGACATTTGTGGGTATGGTGTACCAGCATTGAAAAGAG 29658 Query 63631 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63690 | || | || || ||||| ||||| | | | | ||| || ||| || || Sbjct 29659 TTGGTGTGGCATGTGTAAAGAGTTTTTGACTTAATTTCTCGTAGGTAAGAATTGCATTGT 29718 Query 63691 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 63750 | ||||| |||||| || | | |||||||||| |||||| || || | ||||| Sbjct 29719 CGATATCGTTACCATGAATACCGATAGAAACACGCATTAGCATGTGTTGTGGACGTTCAA 29778 Query 63751 CGATCTTGTTGTTTATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63809 |||| | ||||| | | | ||| || || ||| || ||||| |||||||| | Sbjct 29779 CGATGCTATTGTTGA-TACGATGAAGATATGAACGTTCTAATGTTTTGAAACCAAAGAAA 29837 Query 63810 TTGTATGAAAAGTCTCGTTCGTAA 63833 | ||| || || |||| |||| Sbjct 29838 TCGTAATCGAAATCACGTTGGTAA 29861 >seq213 Length=53756 Score = 114 bits (126), Expect = 2e-20 Identities = 209/303 (69%), Gaps = 5/303 (2%) Strand=Plus/Minus Query 33599 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33658 |||| || ||||| |||||||| || || || || || || ||||||||||| || | || Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 33659 TCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTG 33718 | || || || | |||| || | |||||| || || || || ||| || | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 33719 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGTGTTAGTT---TATTC 33774 |||| || || || |||| ||||||| |||| | | || | |||| || || Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGT-TGAGTTTACTACTC 47814 Query 33775 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33834 ||||| |||| |||| | | ||| | |||||| |||||||||| ||| ||||| Sbjct 47813 CAATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCT 47754 Query 33835 TTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGA 33894 | ||||||||| ||||||| || |||| ||||| || | |||||||||| | | Sbjct 47753 TGTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATCTTTA 47694 Query 33895 TTT 33897 ||| Sbjct 47693 TTT 47691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940978314840