Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq230 275 2e-68 seq7 114 3e-20 >seq230 Length=51241 Score = 275 bits (304), Expect = 2e-68 Identities = 1136/1778 (64%), Gaps = 59/1778 (3%) Strand=Plus/Minus Query 363426 TCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGG 363485 ||||||||| | || |||||||| || || || ||| ||||||||||| |||| || Sbjct 29798 TCGTATCAACAATAGCATCGTTGAACGTCCACAACACATGCTAATGCGTGTTTCTATCGG 29739 Query 363486 TATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGT 363545 ||| ||| | ||| | || || ||| || || || ||||| | Sbjct 29738 TATTCATGGTAACGATATCGACAATGCAATTCTTACCTACGAGAAATTAAGTCAAAAACT 29679 Query 363546 ATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTC 363605 || || || ||||| ||||| | | ||||||||| || | | ||||| ||||| || Sbjct 29678 CTTTACACATGCCACACCAACTCTTTTCAATGCTGGTACACCATACCCACAAATGTCCTC 29619 Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 |||||| | | ||||||| || ||||| ||||| ||||| | ||| || || || | Sbjct 29618 ATGCTTTTTAGTTCAAATGAAAGAGGATTCAATCGATGGTATTTATGATACCCTCAAACA 29559 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| | ||||| || |||||| || || ||| | | ||| || ||||||| Sbjct 29558 ATGTGCTTTAATTTCAAAATCTGCAGGTGGTATAGGTATTGCTTGCCATAAGATTCGTGC 29499 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 | ||||| ||||| || || || | ||||| |||| || ||||| || Sbjct 29498 CGCTCAAAGTTATATTCGTGGTACCAATGGCACCAGTAATGGTTTGGTACCAATGCTCCG 29439 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| || | ||||||| | || || || || ||||| || || | ||||| || || Sbjct 29438 TGTTTTCAATGATACTGCTCGTTATGTAGATCAAGGTGGTGGTAAAAGAAAAGGTGCCTT 29379 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 ||| | |||||||| || || | ||||||||||| ||| |||| ||| || || Sbjct 29378 TGCAGTATATCTCGAACCATGGCACTCAGATATTTTTGAATTTATTGAACTCAAAAAGAA 29319 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 || || || ||| || | || | ||||| || || || |||||||| || | Sbjct 29318 TCATGGTAAGGAAGAAATGAGAGCCAGAGATCTCTTTTACGCTCTTTGGGTCAGCGATCT 29259 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTC 364024 ||| ||| | | || || || || |||||||||||||||| || ||||| | Sbjct 29258 TTTCATGGAAAGAGTAGA-ACAAAACGGAGATTGGTCACTCTTTTGTCCTAACGAAGCCC 29200 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 || ||||| ||| || || || || || || || |||||| Sbjct 29199 CACGTCTTGACGAAACTCACTCAGAAGAACATCGTGAACTTTATCTCAAATATGAA-AAT 29141 Query 364085 AGGGAAAGGCTCGTAAGAC----AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 | | | || | |||| |||| || || | || |||||||| |||||||| Sbjct 29140 ACACCAGGCCTTGCTAGACGTGTAATTAAAGCTCAAGAACTTTGGTTTGCAATCATGGAG 29081 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 || || |||| || || ||||| | ||| | || |||||||| || || || ||| Sbjct 29080 TCTCAAGTTGAAACTGGTACACCATTTATTCTCTATAAAGATTCTTGTAATTCTAAATCC 29021 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATA 364259 || || || | |||||||| ||| ||||| || || || |||||||| |||||| |||| Sbjct 29020 AATCAAAAGAATCTTGGTACTATT-AGCAGCAGTAATCTTTGTACCGAAATTATTCAATA 28962 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCC----GGCGT 364315 ||| | || || |||| ||| |||||||| || || || || || | || | | Sbjct 28961 CACATCCCCAGATGAGATTGCTGTATGTAATCTCGCATCCATTGCCTTACCAAAATTCAT 28902 Query 364316 TTGT--AAAAGATGGTAC---------------------TTTTGACCACCAGCATCTTTA 364352 | || |||||| ||| | ||||| || || | ||||| Sbjct 28901 TCGTAGAAAAGAAGGTTCAACCAATCCAAAAGAAAAAGAATTTGATCATCAAAAACTTTA 28842 Query 364353 TGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCC 364412 ||| | || | || ||| ||||| |||| |||| || || || ||||| Sbjct 28841 TGAAATCACTAAAATTGTTACCAAGAATCTTAACAAAATTATTGATCGTAACTACTATCC 28782 Query 364413 AATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 | ||| |||||| | |||||| | | ||||| || |||||| ||||| | || || Sbjct 28781 AGTTCAAGAAGCCAAAACCTCTAATTTAAGACATCGTCCAATTGGTATTGGTATTCAAGG 28722 Query 364473 CCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGA---TTCGCCTGACGCTCGTGT 364529 || ||||| ||||| || || ||| ||||||| | | ||| ||| Sbjct 28721 TCTTGCTGATGTTTTCATTCAACTTCGTATGCCATTTGATGGTACCGCTGCCGC---AAA 28665 Query 364530 TCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTT 364589 |||| | || || ||||| || |||||||| || | || || || || || Sbjct 28664 ATTAAACATTGAAATTGCAGAAACTATTTATTTTGCTGCCCTTACAGCATCACACGAGTT 28605 Query 364590 GGCAAAAACCAAGGGAAAGTAC-TCT---ACTTATGAGGGGTCCCCTCTTTCGCAGGGAA 364645 | | | ||| || | | | || | | | || || || || || | Sbjct 28604 ----ATCTCTTATTGAAGGTCCATATGAAACATTTAAAGGTTCACCAGCCAGCCAAGGTA 28549 Query 364646 AATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGG---GATACGC 364702 |||| | ||| | |||||||| || ||| | || ||||||||| ||| | | Sbjct 28548 TTCTCCAATACGATTTCTGGAATGTTACACCAACAAATCGTTGGAACTGGACTGAT-CTC 28490 Query 364703 TACGTTCCAA-CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCC 364761 | | | || ||||| || |||| ||| ||||| || | | ||| || ||||| Sbjct 28489 AAAGATAAAATTGTTAATAAAGGTGGTCTTCGTAACTCACTTTTAATAGCACCAATGCCA 28430 Query 364762 ACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAAT 364821 || || || ||| |||| || | || |||||||| ||||| ||||| | ||| || || Sbjct 28429 ACTGCATCAACTTCACAAATTTTAGGTAACAACGAATGCTTTGAACCATATACCAGTAAC 28370 Query 364822 CTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAG 364881 |||| || || ||| | | || |||||| | | || ||||| | || || | Sbjct 28369 ATTTACAGTCGTCGTGTTTTAGCTGGTGAATTTACTATTGTCAATAAACAACTTCTCGAA 28310 Query 364882 GATCTTTCCGACCGCGGGCTGTGGGGTGA-CAGCA-TGAAGAACTATATCATCGCCGCTA 364939 ||||| || || | | ||| | ||| | | ||||| | ||| | | Sbjct 28309 GATCTCATGGAGTTAGGAATTT--GGTCACCAGAATTAAAGAATCAAATCGTTCTCAACC 28252 Query 364940 ATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCG 364999 |||||| | || | || ||| ||||||| ||||| || |||||||||| | Sbjct 28251 GTGGTTCAATTCAAAGTATCCCATCCATTCCAGATGATCTTAAAGAACTTTACAAAACAG 28192 Query 365000 TATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCT 365059 | ||||||||| |||| | ||||||||||| || ||||| ||||||||||| Sbjct 28191 TTTGGGAAATTAGACAAAGAACATTAATTGATATGGCTGCTGATCGTGGTGCTTTTATTG 28132 Query 365060 GTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCA 365119 ||| || || || || || || || || | ||||| | || || |||||||| | Sbjct 28131 ATCAAAGTCAAAGTTTCAATGTTTTTATTGCTGAACCAACTTTTGCTAAACTTACATCAA 28072 Query 365120 TGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 ||||||||||| |||||| ||||| || || ||| Sbjct 28071 TGCATTTCTACTCTTGGAAAAAAGGTCTCAAAACTGGT 28034 >seq7 Length=199231 Score = 114 bits (126), Expect = 3e-20 Identities = 324/487 (67%), Gaps = 28/487 (6%) Strand=Plus/Minus Query 145314 ATAAAACGAGGAAAACGAAGAGCAATACCCTTATTTGGGTCAACGATTCCATGTCCTGCC 145373 || ||||| || ||||||||||| ||||| || |||| || | | |||| | | || Sbjct 194734 ATGAAACGTGGGAAACGAAGAGCTATACCTTTGTTTGATTCTAAATTGCCATATGCAGCA 194675 Query 145374 ATGTGAACCGGAGAAATTGACAAATCTGCCGACAATACTTCCCATACTTGAGTTGGACTA 145433 ||||||| || |||||||| | ||| || | || |||||||| ||||| | ||| Sbjct 194674 GTGTGAACTGGGGAAATTGAAAGATCAGCAGCTAAAACTTCCCAAACTTGTGATGGTGAT 194615 Query 145434 AACCAAACATCTGGTTTAAGCGATGGTACATCTGCGACATAGTAATCAGACGGTTTCTGT 145493 ||||||||||||||||||| || || || || ||| | || | ||||| | Sbjct 194614 AACCAAACATCTGGTTTAATAGA--GT-CA-----GATATACGGAACATA---TTTCT-T 194567 Query 145494 GGT------ACAATATGTGGCGTAAGACTG-TCGGACAATTGAATTAAATCTTCATCTGA 145546 ||| | || ||||||| | | | || || | ||| | |||||||| ||| Sbjct 194566 GGTTGATTAATAACATGTGGCTTTA-ATTGCTCTGTAAATGAAGATAAATCTTTATCGCT 194508 Query 145547 AAATCCAGTTCCGATCTTGCATACACTTTGGAACACTTCTTCGTCTGGATCATACACCGC 145606 ||| || || || || || || | ||||||| |||| | |||| ||| || || Sbjct 194507 AAAACCTGTACCAATTTTACAAAGTGTTTGGAATTCTTCATTGTCTTCATCGTAACATGC 194448 Query 145607 AAGAAGGTATGCACCATATACACCAGTACGTTTTCCGCGACCGGTATACC---CCGCAAT 145663 | | ||||| |||||| ||| || | ||| || ||| ||||| | |||| Sbjct 194447 TAATAAATATGCCCCATATGTACCTGTTCTTTTACCTTTACC---ATACCATGCTCCAAT 194391 Query 145664 TGGTACAAGATCACAACTATCACCCATTCC-GGCAAGATAATCCTTTTTAAGTTTTAGCC 145722 ||| || | ||| ||||||| ||| || ||| | ||||| ||||| | ||| |||| Sbjct 194390 TGGAACTAAATCTAAACTATCGGTCATACCTTGCATG-TAATCTTTTTTGATTTTAAGCC 194332 Query 145723 AATTGAGAGAACGTTTCGATGGTTCATAGCTAGAGTTATCGTCCAATGATTTTACCATTA 145782 | || ||||| |||||||| || | || || || | | || ||| ||||| | Sbjct 194331 AGTTATATGAACGACGGGATGGTTCGTAAATTGATTTCTCTTTGAGTGTTTTAACCATAA 194272 Query 145783 GCCCCTC 145789 | || || Sbjct 194271 GACCTTC 194265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303340257324818