Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq86 87.8 2e-12 seq7 86.0 6e-12 seq242 84.2 2e-11 seq20 84.2 2e-11 >seq86 Length=87693 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || |||||||| | || || || |||||||| |||||||| | || || || Sbjct 63507 AGAACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAAAGAGTACGACCATCT 63448 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 |||| || || || ||| | || | ||| || ||||| || ||||| ||||||||||| Sbjct 63447 TCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCT 63388 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC--TCGATGTCGACGGTAACGG 131200 |||||| || | | || | ||||| || || |||| |||| ||| | || Sbjct 63387 TGGATTTTGGTTTTAACATTTTCAATGGTATC--TGAACCTTCGACTTCGAGGGTGATGG 63330 Query 131201 TTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||||| || || ||||| || ||||| ||||| Sbjct 63329 TTTTACCAGTAAGGGTTTTGACAAAAATTTGCAT 63296 >seq7 Length=199231 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || |||||||| | ||| || || ||||| || ||||| || | ||| || || Sbjct 43753 AGAACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAGTCTGAGAGGGTACGACCATCT 43694 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 |||| || |||||||| |||| | ||| || || || || ||||| |||||||| || Sbjct 43693 TCTAATTGTTTGCCTGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 43634 Query 131143 GTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| | | | || | | | || | ||||| | | || | || | |||| || Sbjct 43633 -TGAATCTTGGTTTTAACGTTTTCGATGGTATCTGAGCCTTCAACTTCTAATGTAATAGT 43575 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||||||||| ||||| ||||||||||| |||||| Sbjct 43574 TTTACCGGTAAGAGTCTTTACGAAAATTTGCATG 43541 >seq242 Length=49570 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || |||||||| | || || || |||||||||||||| || | || || || Sbjct 3622 AGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCT 3681 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 |||| || || ||||| | || | | || || || || ||||| ||||||||||| Sbjct 3682 TCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTGTCT 3741 Query 131143 GTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| ||| | || | | | || | |||||| | | || | || | |||| ||| Sbjct 3742 -TGAATTTTAGTTTTAACGTTTTCAATAGTATCTGAGCCTTCAACTTCTAAAGTAATGGT 3800 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||||||||| |||||| |||||||| ||||| Sbjct 3801 TTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 3833 >seq20 Length=149080 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 ||||| || | ||| || || |||||||| |||||||| | ||| || || ||| Sbjct 74504 ACTAAGTGGAGGGTTGATTCTTTTTGAATATTGTAATCTTGTAAGGTACGACCATCTTCT 74563 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | || || || ||| |||||||||| || ||||| || ||||| ||||||||||| | Sbjct 74564 AATTGTTTACCGGCGAAGATTAAACGTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGG 74623 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC--TCGATGTCGACGGTAACGGTTT 131203 ||||| ||||| | || | ||||| || || || | |||| || | ||||| Sbjct 74624 ATTTTAGCCTTGACGTTTTCGATGGTATC--TGAACCTTCAACTTCGAGAGTGATGGTTT 74681 Query 131204 TACC 131207 |||| Sbjct 74682 TACC 74685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008085772160