Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq213 145 8e-30 >seq213 Length=53756 Score = 145 bits (160), Expect = 8e-30 Identities = 206/289 (71%), Gaps = 3/289 (1%) Strand=Plus/Minus Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 ||||||| || | ||| || |||||||||||||| || || |||||||||||||| | | Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 | || || || ||||| | |||||||| || || |||||||| || || | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATC---CC 93566 |||| || || || | || |||||||| || | ||| || || ||| || Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACTACTCC 47813 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 ||||| |||||| || |||||| | |||||| | |||||||| ||||||||||| Sbjct 47812 AATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCTT 47753 Query 93627 TTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||| |||||| ||| || ||| | |||| |||||||||| ||||| Sbjct 47752 GTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAA 47704 Score = 140 bits (154), Expect = 4e-28 Identities = 312/465 (67%), Gaps = 19/465 (4%) Strand=Plus/Minus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 |||||| |||||| ||||| |||||||| || || |||||| || | | | ||| Sbjct 48523 ATCAGCACAAAATTCAATGTATTGAGACATTGAACGACTATTCATACCAATTAAATCTAC 48464 Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT-- 93043 |||| || ||| | || ||||| ||| |||||||| ||| | | || || Sbjct 48463 TGGTAAAGAGTCACAAATAAATTCTTTTTCGCAAACAACGGCATCTCTAATAATGGCTTC 48404 Query 93044 ATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103 | | ||| ||| | |||| | || | | |||| | | || ||||| | | Sbjct 48403 AAGAGTCTTGGATTCGA--GTTTGTTTATTAATTTGGTGTATAAAAGACATGCAAAATTG 48346 Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163 ||| | |||||| || || || || || || || || ||||||||||| | | Sbjct 48345 CAATGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAA 48286 Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223 |||| ||||| | ||| || || | |||||||||| ||||| ||||| || || Sbjct 48285 CCTCTCTTCTTTAACCAGAAAATACTACAAAAACTACCACTGAAAAAGATACCCTCTACT 48226 Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT---TACTGCTGATCCATTTT 93280 || |||||||| || | |||||| |||||| |||| || | | ||||||||| Sbjct 48225 GCGGCAAATGCAACCAAACGTTCTGCAAAA------GAATCACTATTATTAATCCATTTT 48172 Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAA 93340 || |||||||| ||||| || |||||||| || | || || || ||||||||||| | | Sbjct 48171 AATGCCCAATCAGCTTTCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTA 48112 Query 93341 ---TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382 | | |||| | |||| || |||||||| ||||| ||| Sbjct 48111 CTTTTTTGCTCAT---TATCTTTAATATATGTATCAATTAAAAGA 48070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556855238352760