Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq697 100 6e-16 seq486 100 6e-16 seq368 100 6e-16 seq282 100 6e-16 seq98 100 6e-16 seq67 100 6e-16 seq5 86.0 1e-11 seq349 84.2 4e-11 seq246 84.2 4e-11 >seq697 Length=7629 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 4390 AGCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 4449 Query 142563 CCCCACATCGGGC 142575 |||| | | |||| Sbjct 4450 CCCCCCGTTGGGC 4462 >seq486 Length=21698 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 4354 AGCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 4413 Query 142563 CCCCACATCGGGC 142575 |||| | | |||| Sbjct 4414 CCCCCCGTTGGGC 4426 >seq368 Length=33197 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 21185 AGCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 21126 Query 142563 CCCCACATCGGGC 142575 |||| | | |||| Sbjct 21125 CCCCCCGTTGGGC 21113 >seq282 Length=43822 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 35721 AGCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 35662 Query 142563 CCCCACATCGGGC 142575 |||| | | |||| Sbjct 35661 CCCCCCGTTGGGC 35649 >seq98 Length=82442 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 69011 AGCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 69070 Query 142563 CCCCACATCGGGC 142575 |||| | | |||| Sbjct 69071 CCCCCCGTTGGGC 69083 >seq67 Length=99226 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 95186 AGCCCGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGTTCGAG 95245 Query 142563 CCCCACATCGGGC 142575 |||| | | |||| Sbjct 95246 CCCCCCGTTGGGC 95258 >seq5 Length=208392 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 ||||||| | |||||||||||||||||||| || || |||| || ||||||| ||||||| Sbjct 151267 ATAGCCCAGATAGCTCAGTCGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGGGGGTTCG 151208 Query 142561 AGCCCCACATCGGGC 142575 |||||| | | |||| Sbjct 151207 AGCCCCCCTTTGGGC 151193 >seq349 Length=34445 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||| | |||||||||||||||||||| || || |||| || ||||||| |||||||| Sbjct 8584 TAGCCCAGATAGCTCAGTCGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGGGGGTTCGA 8525 Query 142562 GCCCCACATCGGGC 142575 ||||| | | |||| Sbjct 8524 GCCCCCCTTTGGGC 8511 >seq246 Length=49296 Score = 84.2 bits (92), Expect = 4e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 142495 GGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTG 142554 ||| | || |||| | |||||||||||||||||||| || || |||| || ||||||| | Sbjct 45579 GGTAAAATTGCCCAGATAGCTCAGTCGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGGG 45638 Query 142555 GGTTCGAGCCCCACATCGGGCAGAAG 142580 |||||||||||| | | |||| |||| Sbjct 45639 GGTTCGAGCCCCCCTTTGGGC-GAAG 45663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027826277841959