Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq242 111 1e-19 seq246 104 2e-17 seq86 89.7 4e-13 seq7 86.0 4e-12 >seq242 Length=49570 Score = 111 bits (122), Expect = 1e-19 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || ||||||| ||||| || ||||||||||| | ||| |||| | || Sbjct 3833 ATGCAAATTTTCGTTAAAACTTTAACCGGTAAAACCATTACTTTAGAAGTTGAAGGCTCA 3774 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | |||| |||||| || ||||| ||| | || | | ||| Sbjct 3773 GATACTATTGAAAACGTTAAAACTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAA 3714 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || |||||||| ||||| || |||||| |||||||| ||| | | || ||||| Sbjct 3713 CAAAGACTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 3654 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA---TAA 22070 ||||| || ||||| ||||| ||| | || | | ||| |||| || | |||| | | Sbjct 3653 ATTCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGGTTTTTAAATCTTA 3594 Query 22071 TAAAAACCATAAATATA 22087 |||||| |||||| || Sbjct 3593 AAAAAACAATAAATCTA 3577 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| ||||||| | || || |||||||||||| | ||| |||| | || Sbjct 4517 ATGCAAATTTTTGTTAAAACCCTTACTGGTAAAACCATTACCCTCGAAGTCGAAGGCTCA 4458 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | || ||||| |||||||| ||| | || | | ||| Sbjct 4457 GATACAATTGAAAACGTCAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 4398 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || |||||||| |||||||| |||||| |||||||| ||| | | || || ||| Sbjct 4397 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAAT 4338 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || ||||| ||||| ||| | || | | ||| |||| || Sbjct 4337 ATCCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 4291 >seq246 Length=49296 Score = 104 bits (114), Expect = 2e-17 Identities = 170/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| ||||| || ||||||||||| | ||| |||| | Sbjct 10811 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAAACCATTACTTTAGAAGTCGAAGGTTCT 10752 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || ||||| |||||||| ||| | || | | ||| Sbjct 10751 GATACCATCGAAAATGTAAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 10692 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || || ||||| || |||||| |||||||| ||| | |||| |||||| Sbjct 10691 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTACAAT 10632 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA--TAAT 22071 ||||| || ||||| ||||||||| | |||||| | ||| |||| || ||| |||| Sbjct 10631 ATTCAAAAAGAATCAACTCTTCATTTAGTATTAAGATTAAGAGGTGGTCTCTAAATTAAT 10572 Query 22072 AAAA 22075 |||| Sbjct 10571 AAAA 10568 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 || |||||||| ||| | ||||| | || ||||||||||| ||| | || |||| Sbjct 11270 AACATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACCATCACCTTAGAGGTCGAAGGT 11211 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 | || || | | || | || ||||| |||||||| ||| | || | | Sbjct 11210 TCTGATACTATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATCCCACCAGAT 11151 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| |||||||||||||| || |||||| |||||||| ||| | |||| ||| Sbjct 11150 CAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTAC 11091 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 |||||||| || |||||||| || ||| | || ||| Sbjct 11090 AATATTCAAAAAGAATCTACCCTCCATTTAGTTTTA 11055 >seq86 Length=87693 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| | || || |||||||| ||| | ||| |||| || Sbjct 63296 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 63355 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || |||| ||||| || ||||| ||| | || | ||||| Sbjct 63356 GATACCATTGAAAATGTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 63415 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||| || ||||| |||||| |||||||| ||| | | ||||||||| Sbjct 63416 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 63475 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || ||||| ||||| ||| | || | | ||| |||| || Sbjct 63476 ATTCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 63522 >seq7 Length=199231 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| ||||| || ||||||||||| | ||| |||| | || Sbjct 43086 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGGCTCA 43145 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | || || ||| |||||||| ||| | || | ||||| Sbjct 43146 GATACCATCGAGAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAA 43205 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | || ||||| || |||||| ||||||| ||| | | ||||| ||| Sbjct 43206 CAACGTTTAATTTTTGCAGGTAAACAATTAGAAGACGGTCGTACTCTCTCAGATTATAAT 43265 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || ||||||||||| ||| | ||| | | ||| |||| || Sbjct 43266 ATCCAAAAAGAATCTACTCTCCATTTAGTACTTAGATTAAGAGGTGG 43312 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || |||||||| || ||||| ||||| | ||| |||| || Sbjct 43314 ATGCAAATTTTTGTCAAGACATTAACTGGTAAAACTATTACTCTTGAAGTCGAAGGTTCA 43373 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | |||| || ||| |||||||| ||| | || | | ||| Sbjct 43374 GATACCATTGAAAACGTTAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 43433 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | || || || || || ||| |||||||| || | | || |||||| Sbjct 43434 CAACGTTTAATTTTCGCCGGTAAGCAATTAGAAGATGGCCGTACACTCTCTGACTACAAT 43493 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| |||||||||||||| ||| | |||||| | ||| |||| || Sbjct 43494 ATTCAAAAGGAATCTACTCTCCATTTAGTATTAAGATTAAGAGGTGG 43540 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||||||||| || |||||||| ||| | ||| |||| || Sbjct 43770 ATGCAAATTTTTGTCAAAACATTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 43829 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | |||| ||||| |||||||| ||| | || | ||||| Sbjct 43830 GATACCATTGAAAACGTTAAAACTAAAATCCAAGATAAAGAAGGTATTCCACCAGACCAA 43889 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | || || ||||| |||||| |||||||| ||| | | || ||||| Sbjct 43890 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAAC 43949 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA 22067 || || || |||||||| || ||| | || | | || |||| ||| ||||| Sbjct 43950 ATCCAAAAAGAATCTACCCTCCATTTAGTCCTCAGATTGAGAGGTGGAAATTAA 44003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358121312647846