Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8 127 5e-24 >seq8 Length=179212 Score = 127 bits (140), Expect = 5e-24 Identities = 264/385 (69%), Gaps = 10/385 (3%) Strand=Plus/Plus Query 68406 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 68465 ||||| || | ||||| | ||||| ||||| ||||| || || || | |||| || Sbjct 147595 CAAGCCTCCACATCAGAACTTTATGGTAAAGTCCAAGAGATCCCACAATCAGAAACAACA 147654 Query 68466 CCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAA 68525 || |||||||| || || || | ||||| || ||||| |||||||| | | Sbjct 147655 CCATTTTATCCACGTTCTCCATATGCAGTTGCTAAACAATACGCCTATTGGATTGTTGTA 147714 Query 68526 AATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGT 68585 || || ||||| | ||||| ||||||| |||||| ||| || ||||||||| | Sbjct 147715 AACTATCGTGAAGCTTATAATATGTATGCATGCAATGGTATTCTCTTTAATCACGAG--T 147772 Query 68586 CCCAAC--AGAGG-CCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATT 68642 | | || ||||| ||| | || || ||| | || ||||| | || || |||| Sbjct 147773 CACCACGTAGAGGTCCAACCTTT-GTAACTAGAAAGATCACTCGTTTCGTTGCCGGTATT 147831 Query 68643 TTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGG 68700 || | | |||| ||| | | || || |||||||| | || ||| | ||||||| Sbjct 147832 G-CACTTGGAAAGAAAGAAATTCTT-TACCTTGGTAATATTAACGCTAAACGTGATTGGG 147889 Query 68701 GATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATG 68760 | | || || ||||| || ||||| |||||||||||| | |||||||||| || | | Sbjct 147890 GTCACGCCAAAGATTATGTCGAAGCCATGTGGTTGATGTTACAACAAGATAAGCCACAAG 147949 Query 68761 ACTATGTGATTGCAACAGGGAAAAC 68785 | | ||| |||||||| || |||| Sbjct 147950 ATTTTGTTATTGCAACCGGTGAAAC 147974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102868709610650