Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq230 150 2e-31 seq317 84.2 3e-11 seq213 82.4 9e-11 >seq230 Length=51241 Score = 150 bits (166), Expect = 2e-31 Identities = 687/1076 (64%), Gaps = 50/1076 (5%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 ||||| |||||||| || || ||||| || | ||||| | || | |||||| || | Sbjct 28020 CGGAGATAGTACATACCAGTTTTGAGACCTTTTTTCCAAGAGTAGAAATGCATTGATGTA 28079 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | || | | ||||| | || || | || | |||||| |||||| || || Sbjct 28080 AGTTTAGCAAAAGTTGGTTCAGCAATAAAAACATTGAAACTTTGACTTTGATCAATAAAA 28139 Query 113717 CGTCCACGATCCGCCGCCATATCAA-TCACATCCTTCATCTTGATTTCCCACACAGTTCT 113775 |||||||| || |||||||||| | | | ||| || | |||||||| || ||| | Sbjct 28140 GCACCACGATCAGCAGCCATATCAATTAATGTTCTTTGTC-TAATTTCCCAAACTGTTTT 28198 Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTT 113835 ||| || | |||| ||||||||| || |||| |||| || || |||| || Sbjct 28199 GTAAAGTTCTTTAAGATCATCTGGAATGGATGGGATACTTTGAATTGAACCAC---GGTT 28255 Query 113836 G---ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 113892 | || || ||| ||| | || |||||| | || | || ||||||| || | Sbjct 28256 GAGAACGATTTGATTCTTTAATTCTGGTGACCAAATTCCTAACTCCATGAGATCTTCGAG 28315 Query 113893 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 113952 || || |||||||||| | ||| ||||| || | || | || || || | Sbjct 28316 AAGTTGTTTATTGACAATAGTAAATTCACCAGCTAAAACACGACGACTGTAAATGTTACT 28375 Query 113953 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCAT 114012 || ||||| |||||||| || |||||||| || ||||| | || || || || ||||| Sbjct 28376 GGTATATGGTTCAAAGCATTCGTTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGGCAT 28435 Query 114013 GGGTGCCATGAGAAGGCTGTTACGGAGAC--CCTTT-TCCCTAATGCGTTCCTTGAGGGC 114069 ||||| || | ||| |||||| |||| ||||| | ||| || ||||| | Sbjct 28436 TGGTGCTATTAAAAGTGAGTTACGAAGACCACCTTTATTAACAATTTTATCTTTGAGATC 28495 Query 114070 GTCCCAGT-----CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATA 114124 ||||| || | ||| || || | | | ||| | ||| | ||||| ||| Sbjct 28496 AGTCCAGTTCCAACG-ATTTG---TTGGTGT-AACATTCCAGAAATCGTATTGGAGAATA 28550 Query 114125 CCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG 114184 |||||| |||||| || || | |||||| || ||||| || |||| | || ||| Sbjct 28551 CCTTGGCTGGCTGGTGAACCTTTAAATGTTTCATATGGACCTTCAATAAGAGATAACTCG 28610 Query 114185 -GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA---TTGC 114240 | | | || ||||| || ||| || || || ||| | || | |||| Sbjct 28611 TGTGAT-GCTGTAAGGGCAGCAAAATAAATAGTTTCTGCAATTTCAATGTTTAATTTTGC 28669 Query 114241 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 114300 ||| || |||||| | | || ||| || ||||| || |||||||| Sbjct 28670 ---GGCAGCGGTACCATCAAATGGCATACGAAGTTGAATGAAAACATCAGCAAGACCTTG 28726 Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 114360 | ||| | |||||||| |||||||| | |||||| || || | || ||||| Sbjct 28727 AATACCAATACCAATTGGACGATGTCTTAAATTAGAGGTTTTGGCTTCTTGAACTGGATA 28786 Query 114361 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 114420 | || | ||| |||| | || ||||| ||||| |||| || |||||||||| ||| Sbjct 28787 GTAGTTACGATCAATAATTTTGTTAAGATTCTTGGTAACAATTTTAGTGATTTCATAAAG 28846 Query 114421 CTTTTCGTAATCAAA---------------ACTGCGAGTCTCTTCATT--GAC--AT--A 114459 |||| | |||||| | || | |||| || || || | Sbjct 28847 TTTTTGATGATCAAATTCTTTTTCTTTTGGATTGGTTGAACCTTCTTTTCTACGAATGAA 28906 Query 114460 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 114519 || || | ||| || || || |||||||| |||| ||||||| ||||| | Sbjct 28907 TTTTGGTAAGGCAATGGATGCGAGATTACATACAGCAATCTCATCTGGGGATGTGTATTG 28966 Query 114520 TATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 114579 |||||||| ||||| | ||| || |||| || || | ||||||||||| || || Sbjct 28967 AATAATTTCGGTACAAAGATTACTGCTGCTAATAGTACCAAGATTCTTTTGATTGGATTT 29026 Query 114580 TGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACT 114635 | ||||| | ||| || || || || |||| || || || || ||| |||| Sbjct 29027 AGAATTACAAGAATCTTTATAGAGAATAAATGGTGTACCAGTTTCAACTTGAGACT 29082 >seq317 Length=37906 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/201 (70%), Gaps = 5/201 (2%) Strand=Plus/Minus Query 10876 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCG-- 10933 ||| |||||||| ||| || | |||||| | || | ||| ||||| ||||| || Sbjct 22885 AAAACCATCCATTTCAACTAACAATTGATTAAGAGTATTTTCACGTTCGTCATTACCGCC 22826 Query 10934 -GGCATACCACCCGCACTGCGTTGCT-TACCGACGGCGTCAATTTCATCGATGAAAACGA 10991 | | ||||| || | ||||| |||| | ||| ||||||||||| |||||||| | Sbjct 22825 TGAGAAGCCACCTTGACCTC-TTGCTCTACCAATGGCATCAATTTCATCAATGAAAACAA 22767 Query 10992 TACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACAC 11051 |||| ||| ||| | | || | || || | ||||| ||||| | ||| |||| Sbjct 22766 TACATGGTGCATTCTTTCTAGCTAAATCGAATAAATCTCTAACTCTTGATGGACCAACAC 22707 Query 11052 CCACAAACATTTCCACAAAAT 11072 | ||||||||||| || |||| Sbjct 22706 CAACAAACATTTCAACGAAAT 22686 >seq213 Length=53756 Score = 82.4 bits (90), Expect = 9e-11 Identities = 183/270 (68%), Gaps = 5/270 (2%) Strand=Plus/Minus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || ||||| || ||||| ||||| | ||| || || ||| | |||||||| | ||| Sbjct 48342 TGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCT 48283 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 | |||||| ||||||||||| |||||| ||| ||| ||||| ||||| || Sbjct 48282 CTCTTCTTTAACCAGAAAATACTACAAAAACTACCACTGAAAAAGATACCCTCTACTGCG 48223 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || |||| | ||| || ||||| || ||| | | | || ||| || | ||| Sbjct 48222 GCAAATGCAACCAAACGTTCTGCAAA--AGAATCACTAT-TATTAATCCATTTTAATGCC 48166 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG-TTCCTTCTT 126297 || | || || || | ||||| || | ||| | || || | ||| || || ||| || Sbjct 48165 CAATCAGCTTTCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTACTTTTT 48106 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTAT 126327 | || || |||||| || || |||| || Sbjct 48105 TGCTCAT-TATCTTTAATATATGTATCAAT 48077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597347633930920