Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq86 109 1e-18 seq242 100 7e-16 seq7 100 7e-16 seq246 91.5 3e-13 >seq86 Length=87693 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||| | || | |||||||| || || ||||| | ||||||||||| | ||| Sbjct 63288 CGGAGTCTTAAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTA 63229 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | || || ||||| || |||||||| || || || || || ||| Sbjct 63228 CGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCT 63169 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || |||||||| || ||| ||||| ||| |||| ||| || || | Sbjct 63168 TCTTTATCTTGAATCTTGGTTTTGACGTTTTCGATGGTATCTGAGCCTTCGACTTCGAGG 63109 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || || ||||| || |||||||| Sbjct 63108 GTGATGGTTTTACCAGTAAGGGTTTTGACGAAAATTTG 63071 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | |||||||| || || ||||| | ||| ||||||| | ||| | || Sbjct 63967 TCTGAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGAAAGAGTACGACC 63908 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || ||||| || |||||||| || || || || || ||||| Sbjct 63907 ATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCCTT 63848 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| || ||| ||| | ||| |||| ||| || || | ||||| Sbjct 63847 GTCTTGAATCTTGGTTTTGACGTTTTCAATGGTATCTGAGCCTTCGACTTCGAGGGTGAT 63788 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| ||||||||||| Sbjct 63787 GGTTTTACCAGTAAGGGTTTTGACAAAAATTTG 63755 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | |||||||| || || ||||| | || ||||||| | ||| | || Sbjct 63055 TCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTATAGTCAGAAAGAGTACGACC 62996 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || || || || |||||||| || ||||| || || |||||| Sbjct 62995 ATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCTTCTTT 62936 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || ||| ||| | ||| |||| |||||| || | || || Sbjct 62935 GTCTTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAGCCTTCTACCTCAAGGGTAAT 62876 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || ||||| ||||||||||| Sbjct 62875 GGTCTTACCAGTAAGTGTTTTAACAAAAATTTG 62843 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | |||||||| || || ||||| | ||||| |||| | ||| | || Sbjct 63511 TCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAAAGAGTACGACC 63452 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || || ||||| || ||||| || ||||| || || |||||| Sbjct 63451 ATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTT 63392 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || || ||| | ||| |||| ||| || || | ||||| Sbjct 63391 GTCTTGGATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACTTCGAGGGTGAT 63332 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| ||||||||||| Sbjct 63331 GGTTTTACCAGTAAGGGTTTTGACAAAAATTTG 63299 >seq242 Length=49570 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | |||||||| || || ||||| | |||||| |||| | ||| | || Sbjct 4074 TCTAAGGACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACC 4133 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || ||||| || || |||||||| || || || || || |||||| Sbjct 4134 ATCTTCTAATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTT 4193 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || || ||| | || |||| ||| || || || ||||| Sbjct 4194 ATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCTGAGCCTTCAACTTCTAAGGTGAT 4253 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || |||||||| ||||||||||| Sbjct 4254 AGTTTTACCAGTAAGAGTTTTAACAAAAATTTG 4286 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||| | || | |||||||| || || ||||||| ||||||||||| | ||| Sbjct 4525 CGGAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTA 4584 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | || || || || || || || | || || || || ||||||| Sbjct 4585 CGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGAATTCCT 4644 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || || || ||| || ||| | ||| || | |||||| || || Sbjct 4645 TCTTTATCTTGGATTTTGGTCTTTACATTTTCAATGGTATCAGAGCCTTCTACTTCTAAA 4704 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || |||||||| ||||||||||| Sbjct 4705 GTAATGGTCTTGCCAGTAAGAGTTTTAACAAAAATTTG 4742 >seq7 Length=199231 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | ||||| || || || ||||||| ||||||||||| | ||| | || Sbjct 43985 TCTGAGGACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 43926 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || || ||||| || | ||| || ||||| || ||| |||||| Sbjct 43925 ATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGAATACCTTCTTT 43866 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || ||| ||| | ||| |||| ||| || || | ||||| Sbjct 43865 ATCTTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAACCTTCGACTTCGAGGGTGAT 43806 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | ||||| ||||||||||| Sbjct 43805 GGTTTTACCAGTTAATGTTTTGACAAAAATTTG 43773 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | ||||| || || || ||||||| ||||||||||| | ||| | || Sbjct 43073 TCTGAGAACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 43014 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || || || ||||| || | ||| || ||||| || || |||||| Sbjct 43013 ATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGGATACCTTCTTT 42954 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || || || ||| | ||| |||| ||| || || | ||||| Sbjct 42953 ATCTTGGATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACTTCGAGGGTGAT 42894 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | |||||| ||||||||||| Sbjct 42893 GGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 42861 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 |||||||| || |||||||| | |||||||||| | || | |||||||| | ||| Sbjct 43516 TGGAGAGTAGATTCCTTTTGAATATTGTAGTCAGAGAGTGTACGGCCATCTTCTAATTGC 43457 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || |||||||| || | ||| || || || || || |||||| || |||||||| Sbjct 43456 TTACCGGCGAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTG 43397 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || ||| ||| | ||| |||| ||| || || | || || || ||||| || Sbjct 43396 GTTTTAACGTTTTCAATGGTATCTGAACCTTCGACTTCAAGAGTAATAGTTTTACCAGTT 43337 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | || || ||||||||||| Sbjct 43336 AATGTCTTGACAAAAATTTG 43317 >seq246 Length=49296 Score = 91.5 bits (100), Expect = 3e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||| | || | || ||||| || || ||||| | || ||||| | | ||| Sbjct 10819 CGAAGTCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAAAGAGTA 10878 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | || || ||||| || |||||||| || || || || || ||| Sbjct 10879 CGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCT 10938 Query 199529 TCTCGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || || || ||| |||| || ||||| ||| || | ||| || || || Sbjct 10939 TCTTTGTCTTGGAT-TTTAGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAA 10997 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| || | ||||| ||||||||||| Sbjct 10998 GGTGATAGTCTTACCAGTTAAGGTTTTTACAAAAATTTG 11036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178909531158533