Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq242 116 3e-21 seq7 107 1e-18 seq246 93.3 3e-14 >seq242 Length=49570 Score = 116 bits (128), Expect = 3e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 39510 TACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTC 39569 ||| ||||| | ||| ||||||||| |||||||| || | | | || |||| || Sbjct 3852 TACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAGAGAGTACGACCATCTTC 3911 Query 39570 CAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTC--G 39627 |||||||| || ||||||||||||| || ||||| | || | |||||||| || | Sbjct 3912 TAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTG 3971 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 || || | || || | | | ||| |||| || ||| || || |||||||| ||| Sbjct 3972 AATCTTGGTCTTTACAT--TTTCAATTGTATCTGAGCCTTCAACTTCTAAAGTAATAGTT 4029 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| ||||||||||| ||||| || ||||| Sbjct 4030 TTACCGGTTAAAGTTTTGACGAAAATTTGCAT 4061 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 || || ||||| | ||| ||||||||| || || || || | | | || |||| Sbjct 3622 AGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCT 3681 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 || |||||||| || ||||||| | | || ||||| | || | ||||||||||| Sbjct 3682 TCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTGTCT 3741 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 ||||| ||||| | | | || |||| || ||| || || |||||||| ||| Sbjct 3742 TGAATTTTAGTTTTAACGTTTTCAATAGTATCTGAGCCTTCAACTTCTAAAGTAATGGTT 3801 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| ||||||||||| ||||| || ||||| Sbjct 3802 TTACCGGTTAAAGTTTTAACGAAAATTTGCAT 3833 >seq7 Length=199231 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 ||||| ||||| | ||| ||||||||| ||||||||||| | | | || | || Sbjct 43297 AGTACTAAATGGAGAGTAGATTCTTTTTGGATATTATAATCTGAGAGAGTACGACCGTCT 43238 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 || |||||||| || ||||||||||||| || || || | || | |||||||| || Sbjct 43237 TCTAATTGTTTACCTGCAAAAATTAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCT 43178 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 || || ||| | || | | || |||| || ||| || || | |||||| ||| Sbjct 43177 TGAATCTTGGTTTTGACGTTCTCGATGGTATCTGAGCCTTCAACTTCAAGAGTAATGGTT 43118 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| ||||||||||| || || || ||||| Sbjct 43117 TTACCAGTTAAAGTTTTGACAAAAATTTGCAT 43086 >seq246 Length=49296 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 || ||||| | ||| ||||||||| |||||||| |||| | | || |||| || Sbjct 10831 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAAAGAGTACGACCATCTTCT 10890 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 |||||||| ||| ||||||| | ||| || ||||| | || | ||||||||||| Sbjct 10891 AATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGG 10950 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 ||||| ||| | | | | || || | | ||| || || || || || || ||| Sbjct 10951 ATTTTAGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAGGTGATAGTCTTA 11010 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || ||||| |||||||| || || ||||| Sbjct 11011 CCAGTTAAGGTTTTTACAAAAATTTGCAT 11039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347366217379967