Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7 125 7e-24 seq86 107 2e-18 seq242 96.9 3e-15 seq246 95.1 1e-14 >seq7 Length=199231 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| | || || |||||||||||| |||| ||||| | | Sbjct 43770 ATGCAAATTTTTGTCAAAACATTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 43829 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | || ||||| ||||| ||||||| || ||||| || ||||| | ||||| Sbjct 43830 GATACCATTGAAAACG-TTAAAACTAAAATCCAAGATAAAGAAGGTATTCCACCAGACCA 43888 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | |||| ||| || ||||| | || || | || || ||| |||||||| Sbjct 43889 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 43948 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||| | || || ||||| || || | |||||||| || Sbjct 43949 CATCCAAAAAGAATCTACCCTCCATTTAGTCCTCAGATTGAGAGGTGG 43996 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| || || ||||| | || || |||||||||||| |||| ||||| | Sbjct 42855 AATATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGT 42914 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | || | | | ||| ||||| ||||||| || ||||| || || || | ||| Sbjct 42915 TCAGATACCATTGAAAATGTTAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAGAC 42974 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || | |||| ||| || ||||| | || || | || || ||| |||||| Sbjct 42975 CAACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTAC 43034 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| ||| | || || ||||| || || | |||||||| || Sbjct 43035 AACATCCAAAAAGAATCTACCCTCCATTTAGTTCTCAGATTGAGAGGTGG 43084 >seq86 Length=87693 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || || |||||||||||| |||| ||||| | | Sbjct 63296 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 63355 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | ||| ||||| ||||||| |||||||| || || || | |||||| Sbjct 63356 GATACCATTGAAAATGTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 63415 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || |||| ||| || ||||| | || || | || || || || ||||| Sbjct 63416 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 63475 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||| ||| | || || ||||| || || | || ||||| || Sbjct 63476 ATTCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 63522 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || |||||||||||| |||| ||||| | | | Sbjct 63068 ATGCAAATTTTCGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63127 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | ||||| | ||| || || | || ||||| || || || | || || Sbjct 63128 GATACCATCGAAAACG-TCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCA 63186 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||||| || || ||||| | || || | || || ||| |||||||| Sbjct 63187 ACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 63246 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||| ||||| ||| | || || ||||| || Sbjct 63247 CATTCAAAAAGAATCAACTCTCCATTTAGT 63276 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || || |||||||||||| |||| ||||| | | | Sbjct 63752 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63811 Query 38304 GACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | || ||||| | ||| || || | ||||| || || || || | || || Sbjct 63812 GATACCATTGAAAACG-TCAAAACCAAGATTCAAGACAAGGAAGGTATCCCACCAGATCA 63870 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||||| || || ||||| | || || | || || || ||||| || Sbjct 63871 ACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAA 63930 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||| ||| | || || ||||| || || | || ||||| || Sbjct 63931 CATTCAAAAAGAATCAACTCTCCATTTAGTTCTCAGATTAAGAGGTGG 63978 >seq242 Length=49570 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || ||||| ||||| || | || || || | | | Sbjct 4745 ATGCAAATTTTTGTTAAAACTCTTACTGGCAAGACCATTACTTTAGAAGTAGAAGGCTCT 4686 Query 38304 GACAGCGT-GCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | ||| | |||||| ||||||| || ||||| |||||||| | || | Sbjct 4685 GATACCATTGAAAATG--TAAAGACCAAAATCCAAGATAAAGAAGGAATTCCACCAGATC 4628 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| | || |||| || || ||||| | || || | || || ||| ||||||| Sbjct 4627 AACAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACA 4568 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 |||||||||| ||| | || || ||||| || Sbjct 4567 ACATCCAAAAAGAATCAACTCTCCATTTAGT 4537 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| | || || |||||||| || | || || || | | | Sbjct 3833 ATGCAAATTTTCGTTAAAACTTTAACCGGTAAAACCATTACTTTAGAAGTTGAAGGCTCA 3774 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | ||||| ||||| ||||| | |||||||| || || || | || || Sbjct 3773 GATACTATTGAAAACG-TTAAAACTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCA 3715 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | || |||| || || ||||| | || || | || || || |||||||| Sbjct 3714 ACAAAGACTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTACAA 3655 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||| ||| | || || ||||| || || | || ||||| || Sbjct 3654 CATTCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 3607 >seq246 Length=49296 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 38236 TTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 38295 || |||| |||||||| || |||||||| || || ||||||||||||||| | || |||| Sbjct 11275 TTTAAAACATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACCATCACCTTAGAGGTCG 11216 Query 38296 AGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCG 38355 | | | || | | ||| | |||| ||||||| || ||||| || || || Sbjct 11215 AAGGTTCTGATACTATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATCCCAC 11156 Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 | || ||||| | || || | || || ||||| | || || | || || || || Sbjct 11155 CAGATCAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCG 11096 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||||| || ||||| ||| | || || ||||| || Sbjct 11095 ACTACAATATTCAAAAAGAATCTACCCTCCATTTAGT 11059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167804524160