Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq230 295 8e-75 seq213 113 6e-20 seq317 109 7e-19 seq8 89.7 6e-13 >seq230 Length=51241 Score = 295 bits (326), Expect = 8e-75 Identities = 1087/1674 (65%), Gaps = 74/1674 (4%) Strand=Plus/Minus Query 111711 CACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTC 111770 || || |||||||| || ||||| |||||||||||| || ||||||||| || || Sbjct 29671 CATGCCACACCAACTCTTTTCAATGCTGGTACACCATACCCACAAATGTCCTCATGCTTT 29612 Query 111771 CTTATTGCAAAC-AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGC 111829 ||| | |||| || |||||||||||| |||| ||||| | || |||| ||||||| Sbjct 29611 -TTAGTTCAAATGAAAGAGGATTCAATCGATGGTATTTATGATACCCTCAAACAATGTGC 29553 Query 111830 CCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAA 111889 ||| ||||| | || |||||||| || || |||| | | | ||| | Sbjct 29552 TTTAATTTCAAAATCTGCAGGTGGTATAGGTATTGCTTGCCATAAGATTCGTGCCGCTCA 29493 Query 111890 GTCTCGTATTAGAGGTACAAATGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTA 111947 | |||| | ||||| ||||| | ||| ||||| | | |||||||| || || Sbjct 29492 AAGTTATATTCGTGGTACCAATGGC--ACCAGTAATGGTTTGGTACCAATGCTCCGTGTT 29435 Query 111948 TTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTC---GCAAGGGATCTATCGCA 112004 || || | || || || |||||| | |||| ||| || | || || | | ||| Sbjct 29434 TTCAATGATACTGCTCGTTATGTAGATCAAGGTGGTGGTAAAAGAAAAGGTGCCTTTGCA 29375 Query 112005 GTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA 112064 || ||||| || ||||||||| | ||||| | || || |||| | || || Sbjct 29374 GTATATCTCGAACCATGGCACTCAGATATTTTTGAATTTATTGAACTCAAAAAGAATCAT 29315 Query 112065 GGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTC 112124 ||| | || || | | | | |||||||| | |||||| ||| | ||||| ||| Sbjct 29314 GGTAAGGAAGAAATGAGAGCCAGAGATCTCTTTTACGCTCTTTGGGTCAGCGATCTTTTC 29255 Query 112125 ATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGT 112184 ||| | ||||| || | | || ||||||| ||||||||||| || | || || || Sbjct 29254 ATGGAAAGAGTAGAACAAAACGGAGATTGGTCACTCTTTTGTCCTAACGAAGCCCCACGT 29195 Query 112185 CTCTCCGATGC---CGTGGGTGAGGAGTTTGAAGCCCTCTA-CACAAAGTACGAGGAAGA 112240 || ||| | | | || | |||| || || | |||| || || || | Sbjct 29194 CTTGACGAAACTCACTCAGAAGAACATCGTGAA---CTTTATCTCAAA-TATGAA-AATA 29140 Query 112241 AAGTCGGGCGACTGC--GACGG----TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAA 112294 | || | ||| |||| | |||| || | ||| || || | | Sbjct 29139 CACCAGGCCT--TGCTAGACGTGTAATTAAAGCTCAAGAACTTTGGTTTGCAATCATGGA 29082 Query 112295 GTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAG 112354 ||||||| || ||||||||||||| ||| || || ||||| | ||||| || Sbjct 29081 GTCTCAAGTTGAAACTGGTACACCATTTATTCTCTATAAAGATTCTTGTAATTCTAAATC 29022 Query 112355 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATT 112414 |||||||||||| | ||| || | || || || ||||| ||||| | ||| Sbjct 29021 CAATCAAAAGAATCTTGGTACTATTAGCAGCAGTAATCTTTGTACCGAAATTATTCAATA 28962 Query 112415 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--AT 112472 ||| | |||||||| ||||| ||||| |||||||| || || | || || | || Sbjct 28961 CACATCCCCAGATGAGATTGCTGTATGTAATCTCGCATCCATTGCCTTACCAAAATTCAT 28902 Query 112473 --GTGGA-----------------TCCAGA-GACAAAGACATTTGATTATGAAAAACTCC 112512 || || |||| | || ||||| ||||||| || ||||||| Sbjct 28901 TCGTAGAAAAGAAGGTTCAACCAATCCAAAAGAAAAAGA-ATTTGATCATCAAAAACTTT 28843 Query 112513 ACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACC 112572 | ||| | || |||| ||| || || || || |||| | |||||||| | || | || | Sbjct 28842 ATGAAATCACTAAAATTGTTACCAAGAATCTTAACAAAATTATTGATCGTAACTACTATC 28783 Query 112573 CCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAG 112632 | ||| | || | |||||| | ||||| |||||||||||| | ||| | |||| Sbjct 28782 CAGTTCAAGAAGCCAAAACCTCTAATTTAAGACATCGTCCAATTGGTATTGGTATTCAAG 28723 Query 112633 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATT---CCGACGAAGCGAAGG 112689 |||| || ||||| ||||||| ||| |||||||| ||| | || || Sbjct 28722 GTCTTGCTGATGTTTTCATTCAACTTCGTATGCCATTTGATGGTACCGCTGCCGCAAAAT 28663 Query 112690 AAATCAATGCGCGTATATTTGAGACA--ATGTATCACGCCGCTCTTGAGGCGAGTTCGGA 112747 || || || | ||| ||| | || ||| || || ||| || || Sbjct 28662 TAAACATTG-----AAATTGCAGAAACTATTTATTTTGCTGCCCTTACAGCATCACACGA 28608 Query 112748 GTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGT 112807 ||| | |||| |||||||||||||| ||| | ||||| ||||| ||||| | Sbjct 28607 GTTATCTCTTATTGAAGGTCCATATGAAACATTTAAAGGTTCACCAGCCAGCCAAGGTAT 28548 Query 112808 GCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-TCACTACGACTGGGACGCTCTCA 112866 || |||| ||| | ||| || || | ||||| || | ||||| | ||||| Sbjct 28547 TCTCCAATACGATTTCTGG-AATGTTACACCAACAAATCGTTGGAACTGGACTGATCTCA 28489 Query 112867 AGGAACGCATCAAGGAGAAGGGT---CTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 112923 | || || | || ||| ||||||||| ||||| || ||||||||||||| Sbjct 28488 AAGATAAAATTGTTAATAAAGGTGGTCTTCGTAACTCACTTTTAATAGCACCAATGCCAA 28429 Query 112924 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACA 112983 | || || || ||||||| || ||||| || |||||||||||||| || || | |||| Sbjct 28428 CTGCATCAACTTCACAAATTTTAGGTAACAACGAATGCTTTGAACCATATACCAGTAACA 28369 Query 112984 TCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATG 113043 | || | | | || || || ||| |||||||| || || || | || | Sbjct 28368 TTTACAGTCGTCGTGTTTTAGCTGGTGAATTTACTATTGTCAATAAACAACTTCTCGAAG 28309 Query 113044 ACCTCAAAGAGATTGGTCTCTGGTC-CAAGGATATGAAGGATCTCATGGT--GAAAGCGG 113100 | |||| ||| | || | ||||| | || || | ||| ||| || || || | Sbjct 28308 ATCTCATGGAGTTAGGAATTTGGTCACCAGAAT-TAAAGAATCAAATCGTTCTCAACC-- 28252 Query 113101 GTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATT-AAGAAGTTGTACCGCACA 113159 ||||||| ||||||| ||| ||||||||||| || ||||| || ||| ||| Sbjct 28251 GTGGTTCAATTCAAAGTATCCCATCCATTCCAGATGATCTTAAAGAACTT-TACAAAACA 28193 Query 113160 GTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCAT 113218 ||||||||||| ||| ||| | | ||||| ||||| || ||||||||| || || Sbjct 28192 GTTTGGGAAAT-TAGACAAAGAACATTAATTGATATGGCTGCTGATCGTGGTGCTTTTAT 28134 Query 113219 TGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTC 113278 |||||||||||||||| | ||| | || || | ||||| | | || || | || Sbjct 28133 TGATCAAAGTCAAAGTTTCAATGTTTTTATTGCTGAACCAACTTTTGCTAAACTTACATC 28074 Query 113279 TATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 113332 ||||| | ||| |||||| || ||||||||||| || ||||| || ||||| Sbjct 28073 AATGCATTTCTACTCTTGGAAAAAAGGTCTCAAAACTGGTATGTACTATCTCCG 28020 >seq213 Length=53756 Score = 113 bits (124), Expect = 6e-20 Identities = 151/208 (73%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 102112 TTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT 102171 ||||||||||| |||||||||| |||||||| | || ||| || ||| | ||| || Sbjct 48138 TTCCATGTATTAAAAAGAAAGCTGATTGGGCATTAAAATGGATTAATA-ATAGTGA--TT 48194 Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 | ||||| || || | | |||||||| || ||||||||||| ||| |||| | Sbjct 48195 CTTTTGCAGAACGTTTGGTTGCATTTGCCGCAGTAGAGGGTATCTTTTTCAGTGGTAGTT 48254 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 | || ||||| ||| | |||||| ||||| | ||||||||| | ||| || |||| Sbjct 48255 TTTGTAGTATTTTCTGGTTAAAGAAGAGAGGTTTAATGCCAGGTTTAACCTTTTCAAACG 48314 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCA 102319 | | ||||||||||| || || || || Sbjct 48315 AATTAATCTCTCGTGATGAAGGTCTTCA 48342 >seq317 Length=37906 Score = 109 bits (120), Expect = 7e-19 Identities = 222/321 (69%), Gaps = 9/321 (3%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGC- 16030 |||||||||||| || || | || |||| ||| | ||| ||||| ||||| ||| Sbjct 22885 AAAACCATCCATTTCAACTAACAATTGATTAAGAGTATTTTCACGTTCGTCATTACCGCC 22826 Query 16031 TGGCATACCACCAGCACTGCGTTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGA 16089 || | ||||| || | ||||| | ||| ||||||||| ||||||||||| || | Sbjct 22825 TGAGAAGCCACCTTGACCTC-TTGCTCTACCAATGGCATCAATTTCATCAATGAAAACAA 22767 Query 16090 TGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCAC 16147 | |||||| ||| | | ||| | || || | ||| | || || |||| | || || Sbjct 22766 TACATGGTGCATTCTTTCTAGCTAAATCGAATAAATCTC-TA-ACTCTTGATGGACCAAC 22709 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207 |||||||||||| || || || | || | || | | ||| || ||||| | ||| Sbjct 22708 ACCAACAAACATTTCAACGAAATCTGAACCTGAGGTTGAAAAGAATGGTACATTTGCTTC 22649 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 ||| ||| | ||| ||| | | ||| ||||| |||||||| ||| | || | || Sbjct 22648 ACCAGCAGTTGCTTTGGCAATTAAAGTTTTACCAGTACCTGGTGGACCAACAAGAATTGC 22589 Query 16268 ACCTCGTGGAATCTTGGCGCC 16288 ||||| |||||| || ||||| Sbjct 22588 ACCTCTTGGAATTTTAGCGCC 22568 >seq8 Length=179212 Score = 89.7 bits (98), Expect = 6e-13 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 13869 GGTAACATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGG 13928 ||||| || ||||| | | |||||||||||||| || || ||||| ||||| |||||| Sbjct 147862 GGTAATATTAACGCTAAACGTGATTGGGGTCACGCCAAAGATTATGTCGAAGCCATGTGG 147921 Query 13929 CTCATGCTTCAACAAGAGGAAGCC-GACGAATATGTAGTAGCAACGGGTGAGACCCATTC 13987 | ||| | |||||||| ||||| | || | ||| | ||||| ||||| |||||||| Sbjct 147922 TTGATGTTACAACAAGA-TAAGCCACAAGATTTTGTTATTGCAACCGGTGAAACCCATTC 147980 Query 13988 AGT 13990 ||| Sbjct 147981 AGT 147983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620736200335280